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预测澳大利亚罗斯河病毒的流行病学模型:系统评价。

Epidemiological models for predicting Ross River virus in Australia: A systematic review.

机构信息

Mater Research Institute-University of Queensland (MRI-UQ), Brisbane, Queensland, Australia.

Research and Development, Australian Red Cross Lifeblood, Brisbane, Queensland, Australia.

出版信息

PLoS Negl Trop Dis. 2020 Sep 24;14(9):e0008621. doi: 10.1371/journal.pntd.0008621. eCollection 2020 Sep.

DOI:10.1371/journal.pntd.0008621
PMID:32970673
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7537878/
Abstract

Ross River virus (RRV) is the most common and widespread arbovirus in Australia. Epidemiological models of RRV increase understanding of RRV transmission and help provide early warning of outbreaks to reduce incidence. However, RRV predictive models have not been systematically reviewed, analysed, and compared. The hypothesis of this systematic review was that summarising the epidemiological models applied to predict RRV disease and analysing model performance could elucidate drivers of RRV incidence and transmission patterns. We performed a systematic literature search in PubMed, EMBASE, Web of Science, Cochrane Library, and Scopus for studies of RRV using population-based data, incorporating at least one epidemiological model and analysing the association between exposures and RRV disease. Forty-three articles, all of high or medium quality, were included. Twenty-two (51.2%) used generalised linear models and 11 (25.6%) used time-series models. Climate and weather data were used in 27 (62.8%) and mosquito abundance or related data were used in 14 (32.6%) articles as model covariates. A total of 140 models were included across the articles. Rainfall (69 models, 49.3%), temperature (66, 47.1%) and tide height (45, 32.1%) were the three most commonly used exposures. Ten (23.3%) studies published data related to model performance. This review summarises current knowledge of RRV modelling and reveals a research gap in comparing predictive methods. To improve predictive accuracy, new methods for forecasting, such as non-linear mixed models and machine learning approaches, warrant investigation.

摘要

罗斯河病毒(RRV)是澳大利亚最常见和分布最广的虫媒病毒。RRV 的流行病学模型增加了对 RRV 传播的理解,并有助于提供爆发的早期预警,以降低发病率。然而,RRV 的预测模型尚未得到系统的审查、分析和比较。本系统评价的假设是,总结应用于预测 RRV 疾病的流行病学模型,并分析模型性能,可以阐明 RRV 发病率和传播模式的驱动因素。我们在 PubMed、EMBASE、Web of Science、Cochrane Library 和 Scopus 中进行了系统的文献检索,以寻找使用基于人群的数据研究 RRV 的研究,这些研究纳入了至少一个流行病学模型,并分析了暴露与 RRV 疾病之间的关联。共纳入 43 篇文章,均为高质量或中高质量文章。其中 22 篇(51.2%)使用了广义线性模型,11 篇(25.6%)使用了时间序列模型。27 篇(62.8%)文章将气候和天气数据作为模型协变量,14 篇(32.6%)文章将蚊子丰度或相关数据作为模型协变量。这些文章共纳入了 140 个模型。降雨量(69 个模型,49.3%)、温度(66 个,47.1%)和潮高(45 个,32.1%)是使用最广泛的三种暴露因素。有 10 项研究(23.3%)发表了与模型性能相关的数据。本综述总结了目前对 RRV 建模的认识,并揭示了在比较预测方法方面存在的研究空白。为了提高预测准确性,值得研究用于预测的新方法,如非线性混合模型和机器学习方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4476/7537878/15487276884b/pntd.0008621.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4476/7537878/5c29208005d8/pntd.0008621.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4476/7537878/15487276884b/pntd.0008621.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4476/7537878/5c29208005d8/pntd.0008621.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4476/7537878/15487276884b/pntd.0008621.g002.jpg

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