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降解蓝藻毒素微囊藻毒素-LR的细菌分离株的全基因组测序

Whole-Genome Sequencing of Bacterial Isolates That Degrade the Cyanobacterial Toxin Microcystin-LR.

作者信息

McCartney Alexander T, Yeo Ji-Youn, Blomquist Thomas M, Huntley Jason F

机构信息

Bioinformatics Program, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio, USA.

Department of Pathology, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio, USA.

出版信息

Microbiol Resour Announc. 2020 Oct 1;9(40):e00959-20. doi: 10.1128/MRA.00959-20.

Abstract

We previously demonstrated that 13 bacterial isolates from Lake Erie, when grown in groups of four to five isolates per group, degraded the cyanobacterial toxin microcystin-LR (MC-LR) into nontoxic fragments. Whole-genome sequencing of these bacteria was performed to provide genus and species information and to predict putative MC-LR-degrading genes.

摘要

我们之前证明,从伊利湖分离出的13株细菌,当以每组四到五株的群体形式培养时,会将蓝藻毒素微囊藻毒素-LR(MC-LR)降解为无毒片段。对这些细菌进行了全基因组测序,以提供属和种的信息,并预测可能的MC-LR降解基因。

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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
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