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中肠中植物细胞壁降解酶基因的表达谱分析

Expression Profiling of Plant Cell Wall-Degrading Enzyme Genes in Midgut.

作者信息

Gao Peng, Liu Zhenkai, Wen Junbao

机构信息

Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China.

Research Institute of Forestry New Technology, Chinese Academy of Forestry, Beijing, China.

出版信息

Front Physiol. 2020 Sep 4;11:1111. doi: 10.3389/fphys.2020.01111. eCollection 2020.

Abstract

In China, the wood-boring weevil damages and eventually kills the tree of heaven . To feed and digest the cell wall of , requires plant cell wall-degrading enzymes (PCWDEs). In the present study, we used next-generation sequencing to analyze the midgut transcriptome of Using three midgut transcriptomes, we assembled 21,491 unigenes from 167,714,100 clean reads. We identified 25 putative PCWDEs, including 11 cellulases and 14 pectinases. We constructed phylogenetic trees with a maximum likelihood algorithm to elucidate the relationships between sequences of the PCWDE protein families and speculate the functions of the PCWDE genes in . The expression patterns of 17 enzymes in the midgut transcriptome were analyzed in various tissues by quantitative real-time PCR (RT-qPCR). The relative expression levels of 12 genes in the midgut and two genes in the proboscis were significantly higher than those in the other tissues. The proboscis and midgut are the digestive organs of insects, and the high expression level indirectly indicates that these genes are related to digestion. The present study has enabled us to understand the types and numbers of the PCWDEs of and will be helpful for research regarding other weevils' PCWDEs in the future.

摘要

在中国,蛀木象鼻虫会损害并最终杀死臭椿。为了摄取和消化臭椿的细胞壁,需要植物细胞壁降解酶(PCWDEs)。在本研究中,我们使用二代测序技术分析了蛀木象鼻虫中肠转录组。利用三个中肠转录组,我们从167,714,100条clean reads中组装得到了21,491个单基因。我们鉴定出了25个假定的PCWDEs,包括11个纤维素酶和14个果胶酶。我们用最大似然算法构建了系统发育树,以阐明PCWDE蛋白家族序列之间的关系,并推测PCWDE基因在蛀木象鼻虫中的功能。通过定量实时PCR(RT-qPCR)分析了中肠转录组中17种酶在不同组织中的表达模式。中肠中12个基因和喙中2个基因的相对表达水平显著高于其他组织。喙和中肠是昆虫的消化器官,高表达水平间接表明这些基因与消化有关。本研究使我们了解了蛀木象鼻虫PCWDEs的类型和数量,并将有助于未来对其他象鼻虫PCWDEs的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9cf6/7500146/551e45186b39/fphys-11-01111-g002.jpg

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