Xie Xiaoman, Spiteller Dieter, Huhn Thomas, Schink Bernhard, Müller Nicolai
Department of Biology, Universität Konstanz, Konstanz, Germany.
Konstanz Research School Chemical Biology, Konstanz, Germany.
Front Microbiol. 2020 Sep 4;11:2064. doi: 10.3389/fmicb.2020.02064. eCollection 2020.
The anaerobic degradation of aniline was studied in the sulfate-reducing bacterium . Our aim was to identify the genes and their proteins that are required for the initial activation of aniline as well as to characterize intermediates of this reaction. Aniline-induced genes were revealed by comparison of the proteomes of grown with different substrates (aniline, 4-aminobenzoate, phenol, and benzoate). Most genes encoding proteins that were highly abundant in aniline- or 4-aminobenzoate-grown cells but not in phenol- or benzoate-grown cells were located in the putative gene clusters (aniline degradation), (4-hydroxybenzoyl-CoA reductase) and (phenol degradation). Of these putative gene clusters, only the gene cluster has been studied previously. Based on the differential proteome analysis, four candidate genes coding for kinase subunits and carboxylase subunits were suspected to be responsible for the initial conversion of aniline to 4-aminobenzoate. These genes were cloned and overproduced in . The recombinant proteins were obtained in inclusion bodies but could be refolded successfully. Two subunits of phenylphosphoamidate synthase and two carboxylase subunits converted aniline to 4-aminobenzoate with phenylphosphoamidate as intermediate under consumption of ATP. Only when both carboxylase subunits, one from gene cluster and the other from gene cluster , were combined, phenylphosphoamidate was converted to 4-aminobenzoate in vitro, with Mn, K, and FMN as co-factors. Thus, aniline is degraded by the anaerobic bacterium only by recruiting genes for the enzymatic machinery from different gene clusters. We conclude, that carboxylates aniline to 4-aminobenzoate via phenylphosphoamidate as an energy rich intermediate analogous to the degradation of phenol to 4-hydroxybenzoate via phenylphosphate.
在硫酸盐还原菌中研究了苯胺的厌氧降解。我们的目的是鉴定苯胺初始活化所需的基因及其蛋白质,并表征该反应的中间体。通过比较在不同底物(苯胺、4-氨基苯甲酸、苯酚和苯甲酸)上生长的细菌的蛋白质组,揭示了苯胺诱导的基因。大多数编码在苯胺或4-氨基苯甲酸生长的细菌细胞中高度丰富但在苯酚或苯甲酸生长的细胞中不丰富的蛋白质的基因位于假定的基因簇(苯胺降解)、(4-羟基苯甲酰辅酶A还原酶)和(苯酚降解)中。在这些假定的基因簇中,只有基因簇之前被研究过。基于差异蛋白质组分析,怀疑四个编码激酶亚基和羧化酶亚基的候选基因负责苯胺向4-氨基苯甲酸的初始转化。这些基因被克隆并在大肠杆菌中过量表达。重组蛋白以包涵体形式获得,但可以成功复性。苯膦酰胺合酶的两个亚基和两个羧化酶亚基在消耗ATP的情况下,以苯膦酰胺为中间体将苯胺转化为4-氨基苯甲酸。只有当来自基因簇和基因簇的两个羧化酶亚基组合在一起时,苯膦酰胺才能在体外以锰、钾和黄素单核苷酸为辅因子转化为4-氨基苯甲酸。因此,厌氧细菌仅通过从不同基因簇中募集酶机制的基因来降解苯胺。我们得出结论,该细菌通过苯膦酰胺将苯胺羧化为4-氨基苯甲酸,苯膦酰胺是一种富含能量的中间体,类似于通过苯磷酸盐将苯酚降解为4-羟基苯甲酸。