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宏基因组学揭示了土壤中微生物与……健康之间的相关性。

Metagenomics Reveal Correlations Between Microbial Organisms in Soils and the Health of .

作者信息

Tuo Yu, Dong Zhibao, Wang Xiping, Gao Beibei, Zhu Chunming, Tuo Fei

机构信息

School of Geography and Tourism, Shaanxi Normal University, Xi'an, China.

College of Horticulture, Northwest A&F University, Yangling, China.

出版信息

Front Microbiol. 2020 Sep 8;11:2095. doi: 10.3389/fmicb.2020.02095. eCollection 2020.

Abstract

Biological diversity plays an important role in the stability of ecosystems. The Mu Us Desert (MUD), located in Northern China, is an aeolian desert. Although it has been governed by a series of ecological restoration programs, the MUD still has limited biological diversity. (), a xerophytic plant, has great potential to improve the biological diversity of the MUD. However, the survival rate of in the MUD has been very low. The current study tried to explore the mechanism of the high death rate of in the microbiome perspective. The correlation study between soil community composition and soil properties showed that water-filled pore space (WFPS), pH, EC, AP, NO , and NH possess higher potential to change the bacterial community (18%) than the fungal community (9%). Principal coordinate analysis indicated that the composition of both bacteria ( and ) and fungi () in the root soil can be increased by . By systematically comparing between the fungal diversity in the root soil around and the pathogenic fungus extract from the pathogenic site of , we found that the high death rate of was associated with specific pathogenic fungus and . In addition, the microbiome composition analysis indicated that planting could also influence the portions of bacteria community, which also has great potential to lead to future infection. However, as the extraction and separation of bacteria from plants is challenging, the correlation between pathogenic bacteria and the high death rate of was not studied here and could be explored in future work.

摘要

生物多样性在生态系统的稳定性中起着重要作用。毛乌素沙漠位于中国北方,是一个风沙沙漠。尽管它受到了一系列生态恢复项目的治理,但毛乌素沙漠的生物多样性仍然有限。(某旱生植物)对改善毛乌素沙漠的生物多样性具有巨大潜力。然而,该植物在毛乌素沙漠中的成活率一直很低。当前的研究试图从微生物组的角度探索该植物高死亡率的机制。土壤群落组成与土壤性质之间的相关性研究表明,土壤水分孔隙率(WFPS)、pH值、电导率(EC)、有效磷(AP)、硝态氮(NO₃⁻)和铵态氮(NH₄⁺)改变细菌群落(18%)的潜力高于真菌群落(9%)。主坐标分析表明,该植物可以增加根际土壤中细菌(某两种细菌)和真菌(某真菌)的组成。通过系统比较该植物根际土壤中的真菌多样性与该植物致病部位的致病真菌提取物,我们发现该植物的高死亡率与特定的致病真菌(某两种致病真菌)有关。此外,微生物组组成分析表明,种植该植物还可能影响细菌群落的比例,这也极有可能导致未来的感染。然而,由于从植物中提取和分离细菌具有挑战性,本文未研究致病细菌与该植物高死亡率之间的相关性,未来的工作可以对此进行探索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c81/7506035/b8c6b9915b78/fmicb-11-02095-g001.jpg

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