• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种用于估算光合异养紫色非硫细菌生长的经实验评估的热力学方法。

An Experimentally Evaluated Thermodynamic Approach to Estimate Growth of Photoheterotrophic Purple Non-sulfur Bacteria.

作者信息

Doloman Anna, Seefeldt Lance C

机构信息

Department of Chemistry and Biochemistry, Utah State University, Logan, UT, United States.

出版信息

Front Microbiol. 2020 Sep 3;11:540378. doi: 10.3389/fmicb.2020.540378. eCollection 2020.

DOI:10.3389/fmicb.2020.540378
PMID:33013778
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7494753/
Abstract

Distribution of energy during the growth and formation of useful chemicals by microorganisms can define the overall performance of a biotechnological system. However, to date, this distribution has not been used to reliably predict growth characteristics of phototrophic microorganisms. The presented research addresses this application by estimating the photon-associated Gibbs energy delivered for the photoheterotrophic growth of purple non-sulfur bacteria and production of dihydrogen. The approach is successfully evaluated with the data from a fed-batch growth of nifA fixing N gas in phototrophic conditions and a reliable prediction of growth characteristics is demonstrated. Additionally, literature-available experimental data is collected and used for evaluation of the presented thermodynamic approach to predict photoheterotrophic growth yields. A proposed thermodynamic framework with modification to account for the phototrophic growth can be used to predict growth rates in broader environmental niches and to assess the possibility for the development of novel biotechnological applications in light-induced biological systems.

摘要

微生物在生长和形成有用化学物质过程中的能量分布能够定义生物技术系统的整体性能。然而,迄今为止,这种能量分布尚未被用于可靠地预测光合微生物的生长特性。本研究通过估算为紫色非硫细菌的光异养生长和氢气产生所传递的与光子相关的吉布斯能量来解决这一应用问题。该方法通过光养条件下固定氮气的nifA分批补料培养数据成功进行了评估,并证明了对生长特性的可靠预测。此外,收集了文献中可用的实验数据,并用于评估所提出的预测光异养生长产量的热力学方法。一个经过修改以考虑光养生长的拟议热力学框架可用于预测更广泛环境生态位中的生长速率,并评估在光诱导生物系统中开发新型生物技术应用的可能性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2188/7494753/335b0ede5abc/fmicb-11-540378-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2188/7494753/335b0ede5abc/fmicb-11-540378-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2188/7494753/335b0ede5abc/fmicb-11-540378-g001.jpg

相似文献

1
An Experimentally Evaluated Thermodynamic Approach to Estimate Growth of Photoheterotrophic Purple Non-sulfur Bacteria.一种用于估算光合异养紫色非硫细菌生长的经实验评估的热力学方法。
Front Microbiol. 2020 Sep 3;11:540378. doi: 10.3389/fmicb.2020.540378. eCollection 2020.
2
Engineering the transcriptional activator NifA for the construction of Rhodobacter sphaeroides strains that produce hydrogen gas constitutively.工程转录激活因子 NifA 构建可连续生产氢气的红假单胞菌菌株。
Appl Microbiol Biotechnol. 2019 Dec;103(23-24):9739-9749. doi: 10.1007/s00253-019-10199-1. Epub 2019 Nov 7.
3
System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris.沼泽红假单胞菌厌氧光合异养生长过程中的代谢权衡的系统水平分析。
BMC Bioinformatics. 2019 May 9;20(1):233. doi: 10.1186/s12859-019-2844-z.
4
The nitrogen-fixing gene (nifH) of Rhodopseudomonas palustris: a case of lateral gene transfer?沼泽红假单胞菌的固氮基因(nifH):横向基因转移的一个实例?
Microbiology (Reading). 2004 Jul;150(Pt 7):2237-2246. doi: 10.1099/mic.0.26940-0.
5
Transparent polyvinyl-alcohol cryogel as immobilisation matrix for continuous biohydrogen production by phototrophic bacteria.透明聚乙烯醇冷冻凝胶作为光养细菌连续生物制氢的固定化基质。
Biotechnol Biofuels. 2020 Jun 9;13:105. doi: 10.1186/s13068-020-01743-7. eCollection 2020.
6
The phototrophic bacteria spp. are novel chassis for bioplastic production.光合细菌是用于生物塑料生产的新型底盘细胞。
bioRxiv. 2023 May 17:2023.05.17.541187. doi: 10.1101/2023.05.17.541187.
7
Regulation of uptake hydrogenase and effects of hydrogen utilization on gene expression in Rhodopseudomonas palustris.沼泽红假单胞菌中摄取氢酶的调控及氢利用对基因表达的影响。
J Bacteriol. 2006 Sep;188(17):6143-52. doi: 10.1128/JB.00381-06.
8
Phototrophic N and CO Fixation Using a -H Mediated Electrochemical System With Infrared Photons.利用α-H介导的电化学系统和红外光子进行光养型氮和碳固定
Front Microbiol. 2019 Aug 14;10:1817. doi: 10.3389/fmicb.2019.01817. eCollection 2019.
9
Phototrophic utilization of taurine by the purple nonsulfur bacteria Rhodopseudomonas palustris and Rhodobacter sphaeroides.紫色非硫细菌沼泽红假单胞菌和球形红杆菌对牛磺酸的光合利用。
Microbiology (Reading). 2004 Jun;150(Pt 6):1881-1891. doi: 10.1099/mic.0.27023-0.
10
Phosphoproteomic analysis of Rhodopseudomonas palustris reveals the role of pyruvate phosphate dikinase phosphorylation in lipid production.沼泽红假单胞菌磷酸蛋白质组学分析揭示了丙酮酸磷酸二激酶磷酸化在脂类生产中的作用。
J Proteome Res. 2012 Nov 2;11(11):5362-75. doi: 10.1021/pr300582p. Epub 2012 Oct 15.

本文引用的文献

1
Artificial Photosynthesis at Efficiencies Greatly Exceeding That of Natural Photosynthesis.人工光合作用的效率大大超过自然光合作用。
Acc Chem Res. 2019 Nov 19;52(11):3143-3148. doi: 10.1021/acs.accounts.9b00380. Epub 2019 Oct 8.
2
Evaluation of Lighting Systems, Carbon Sources, and Bacteria Cultures on Photofermentative Hydrogen Production.光照系统、碳源和细菌培养物对光合发酵产氢的评价。
Appl Biochem Biotechnol. 2018 May;185(1):257-269. doi: 10.1007/s12010-017-2655-5. Epub 2017 Nov 10.
3
MbT-Tool: An open-access tool based on Thermodynamic Electron Equivalents Model to obtain microbial-metabolic reactions to be used in biotechnological process.
MbT-Tool:一种基于热力学电子当量模型的开放获取工具,用于获取可用于生物技术过程的微生物代谢反应。
Comput Struct Biotechnol J. 2016 Aug 26;14:325-32. doi: 10.1016/j.csbj.2016.08.001. eCollection 2016.
4
Synthesis of High-Molecular-Weight Polyhydroxyalkanoates by Marine Photosynthetic Purple Bacteria.海洋光合紫色细菌合成高分子量聚羟基脂肪酸酯
PLoS One. 2016 Aug 11;11(8):e0160981. doi: 10.1371/journal.pone.0160981. eCollection 2016.
5
Engineering a cyanobacterium as the catalyst for the photosynthetic conversion of CO2 to 1,2-propanediol.利用工程菌将 CO2 转化为 1,2-丙二醇的光合作用。
Microb Cell Fact. 2013 Jan 22;12:4. doi: 10.1186/1475-2859-12-4.
6
Carbon dioxide fixation as a central redox cofactor recycling mechanism in bacteria.二氧化碳固定作为细菌中一种核心氧化还原辅因子循环机制。
Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11669-75. doi: 10.1073/pnas.1006175107. Epub 2010 Jun 17.
7
A black box mathematical model to calculate auto- and heterotrophic biomass yields based on Gibbs energy dissipation.基于吉布斯自由能耗散计算自养和异养生物量产率的黑箱数学模型。
Biotechnol Bioeng. 1992 Dec 5;40(10):1139-54. doi: 10.1002/bit.260401003.
8
Modeling the electron transport chain of purple non-sulfur bacteria.模拟紫色非硫细菌的电子传递链。
Mol Syst Biol. 2008;4:156. doi: 10.1038/msb4100191. Epub 2008 Jan 15.
9
Thermodynamic electron equivalents model for bacterial yield prediction: modifications and comparative evaluations.用于细菌产量预测的热力学电子当量模型:修正与比较评估
Biotechnol Bioeng. 2007 Jun 1;97(2):377-88. doi: 10.1002/bit.21250.
10
Wastewater treatment and poly-beta-hydroxybutyrate production using lighted upflow anaerobic sludge blanket method.
J Biosci Bioeng. 1999;87(5):683-9. doi: 10.1016/s1389-1723(99)80134-0.