Department of Marine Biotechnology, National Kaohsiung University of Science and Technology, No. 142, Hai-Chuan Rd. Nan-Tzu, Kaohsiung City 811, Taiwan, ROC.
Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung University of Science and Technology, No. 142, Hai-Chuan Rd. Nan-Tzu, Kaohsiung City 811, Taiwan, ROC.
Int J Syst Evol Microbiol. 2020 Nov;70(11):5899-5910. doi: 10.1099/ijsem.0.004491. Epub 2020 Oct 5.
A novel bacterial strain, designated CSW-10, isolated from a freshwater pond in Taiwan, was characterized using a polyphasic taxonomic approach. Cells were Gram-stain-negative, aerobic, non-motile, rod-shaped and formed yellow-coloured colonies. Optimal growth occurred at 30 °C, pH 7, and in the absence of NaCl. Phylogenetic analyses based on 16S rRNA gene sequences and coding sequences of 92 protein clusters indicated that strain CSW-10 formed a phylogenetic lineage in the genus . The 16S rRNA gene sequence similarity indicated that strain CSW-10 was most closely related to TNR-2 (97.6%). Strain CSW-10 showed 69.8-70.7% average nucleotide identity and 19.0-23.0% digital DNA-DNA hybridization identity with the strains of other related species. The major fatty acids of strain CSW-10 were summed feature 8 (C 7 and/or C 6) and C 6. The polar lipid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidyldimethylethanolamine, phosphatidylcholine, one uncharacterized sphingoglycolipid, five uncharacterized aminophospholipids, one uncharacterized phospholipid and one uncharacterized lipid. The predominant polyamines were homospermidine and spermidine. The major isoprenoid quinone was Q-10. Genomic DNA G+C content of strain CSW-10 was 62.0 mol%. On the basis of phenotypic and genotypic properties and phylogenetic inference, strain CSW-10 should represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is CSW-10 (=BCRC 81190 =LMG 31340).
一株从台湾淡水池塘中分离得到的新型细菌菌株 CSW-10,通过多相分类学方法进行了特征描述。细胞革兰氏染色阴性,需氧,不运动,呈杆状,形成黄色菌落。最佳生长条件为 30°C、pH7 和无 NaCl。基于 16S rRNA 基因序列和 92 个蛋白聚类编码序列的系统发育分析表明,菌株 CSW-10 形成了属内的一个系统发育分支。16S rRNA 基因序列相似性表明,菌株 CSW-10 与 TNR-2(97.6%)最为密切相关。菌株 CSW-10 与其他相关 种菌株的平均核苷酸同源性为 69.8-70.7%,数字 DNA-DNA 杂交同源性为 19.0-23.0%。菌株 CSW-10 的主要脂肪酸为 summed feature 8 (C 7 and/or C 6) 和 C 6。极性脂谱由磷脂酰乙醇胺、磷脂酰甘油、双磷脂酰甘油、磷脂酰二甲乙醇胺、磷脂酰胆碱、一种未鉴定的神经酰胺糖脂、五种未鉴定的氨基磷脂、一种未鉴定的磷脂和一种未鉴定的脂组成。主要的多胺是腐胺和亚精胺。主要异戊烯醌是 Q-10。菌株 CSW-10 的基因组 DNA G+C 含量为 62.0 mol%。基于表型和基因型特征以及系统发育推断,菌株 CSW-10 应代表属内的一个新型种,建议将其命名为 sp. nov.。模式菌株为 CSW-10(=BCRC 81190=LMG 31340)。