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γ-伴大豆球蛋白,一种与 GH12 木葡聚糖特异性内切葡聚糖酶抑制剂蛋白(XEGIPs)结构相关的蛋白,表现出对 GH2 β-甘露糖苷酶的抑制活性。

γ-Conglutin, a Protein Structurally Related to GH12 Xyloglucan-Specific Endo-Glucanase Inhibitor Proteins (XEGIPs), Shows Inhibitory Activity against GH2 β-Mannosidase.

机构信息

Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, 20133 Milano, Italy.

出版信息

Int J Mol Sci. 2020 Oct 3;21(19):7305. doi: 10.3390/ijms21197305.

Abstract

γ-conglutin (γC) is a major protein of seeds, but its function is still unknown. It shares high structural similarity with xyloglucan-specific endo-glucanase inhibitor proteins (XEGIPs) and, to a lesser extent, with endoxylanase inhibitors (TAXI-I), active against fungal glycoside hydrolases GH12 and GH11, respectively. However, γC lacks both these inhibitory activities. Since β-galactomannans are major components of the cell walls of endosperm in several legume plants, we tested the inhibitory activity of γC against a GH2 β-mannosidase (EC 3.2.1.25). γC was actually able to inhibit the enzyme, and this effect was enhanced by the presence of zinc ions. The stoichiometry of the γC/enzyme interaction was 1:1, and the calculated was 1.55 μM. To obtain further insights into the interaction between γC and β-mannosidase, an in silico structural bioinformatic approach was followed, including some docking analyses. By and large, this work describes experimental findings that highlight new scenarios for understanding the natural role of γC. Although structural predictions can leave space for speculative interpretations, the full complexity of the data reported in this work allows one to hypothesize mechanisms of action for the basis of inhibition. At least two mechanisms seem plausible, both involving lupin-γC-peculiar structures.

摘要

γ-伴大豆球蛋白(γC)是种子的主要蛋白质,但它的功能尚不清楚。它与木葡聚糖特异性内切葡聚糖酶抑制剂蛋白(XEGIPs)具有高度的结构相似性,与内切木聚糖酶抑制剂(TAXI-I)的相似性较小,分别针对真菌糖苷水解酶 GH12 和 GH11。然而,γC 既没有这两种抑制活性。由于β-半乳糖甘露聚糖是几种豆科植物胚乳细胞壁的主要成分,我们测试了γC 对 GH2 β-甘露糖苷酶(EC 3.2.1.25)的抑制活性。γC 实际上能够抑制该酶,并且锌离子的存在增强了这种抑制作用。γC/酶相互作用的化学计量比为 1:1,计算的 Ki 值为 1.55 μM。为了更深入地了解 γC 和β-甘露糖苷酶之间的相互作用,采用了计算结构生物信息学方法,包括一些对接分析。总的来说,这项工作描述了实验结果,这些结果突出了理解 γC 天然作用的新情况。尽管结构预测可能会为推测性解释留出空间,但本工作中报告的数据的复杂性足以假设抑制作用的作用机制。至少有两种机制似乎是合理的,都涉及羽扇豆 γC 特有的结构。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/811e/7583008/e5f21bae8cc5/ijms-21-07305-g001.jpg

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