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应用靶标重定位和计算机筛选技术,从多房棘球绦虫脂肪酸结合蛋白(FABPs)中寻找可能的药物靶点。

Application of target repositioning and in silico screening to exploit fatty acid binding proteins (FABPs) from Echinococcus multilocularis as possible drug targets.

机构信息

Instituto de Investigaciones Bioquímicas de La Plata (INIBIOLP), Facultad de Ciencias Médicas, Universidad Nacional de La Plata (UNLP)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata, Argentina.

Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.

出版信息

J Comput Aided Mol Des. 2020 Dec;34(12):1275-1288. doi: 10.1007/s10822-020-00352-8. Epub 2020 Oct 17.

DOI:10.1007/s10822-020-00352-8
PMID:33067653
Abstract

Fatty acid binding proteins (FABPs) are small intracellular proteins that reversibly bind fatty acids and other hydrophobic ligands. In cestodes, due to their inability to synthesise fatty acids and cholesterol de novo, FABPs, together with other lipid binding proteins, have been proposed as essential, involved in the trafficking and delivery of such lipophilic metabolites. Pharmacological agents that modify specific parasite FABP function may provide control of lipid signalling pathways, inflammatory responses and metabolic regulation that could be of crucial importance for the parasite development and survival. Echinococcus multilocularis and Echinococcus granulosus are, respectively, the causative agents of alveolar and cystic echinococcosis (or hydatidosis). These diseases are included in the World Health Organization's list of priority neglected tropical diseases. Here, we explore the potential of FABPs from cestodes as drug targets. To this end, we have applied a target repurposing approach to identify novel inhibitors of Echinococcus spp. FABPs. An ensemble of computational models was developed and applied in a virtual screening campaign of DrugBank library. 21 hits belonging to the applicability domain of the ensemble models were identified, and 3 of the hits were assayed against purified E. multilocularis FABP, experimentally confirming the model's predictions. Noteworthy, this is to our best knowledge the first report on isolation and purification of such four FABP, for which initial structural and functional characterization is reported here.

摘要

脂肪酸结合蛋白(FABPs)是一种小型细胞内蛋白,可可逆地结合脂肪酸和其他疏水性配体。在绦虫中,由于它们不能从头合成脂肪酸和胆固醇,因此 FABP 与其他脂质结合蛋白一起被认为是必不可少的,参与了这些亲脂代谢物的运输和输送。修饰特定寄生虫 FABP 功能的药物可能会控制脂质信号通路、炎症反应和代谢调节,这对寄生虫的发育和生存可能至关重要。多房棘球绦虫和细粒棘球绦虫分别是泡型和囊型包虫病(或棘球蚴病)的病原体。这些疾病被世界卫生组织列入优先关注的被忽视热带病清单。在这里,我们探讨了作为药物靶点的绦虫 FABP 的潜力。为此,我们应用了一种目标再利用方法来鉴定新型棘球蚴 FABP 的抑制剂。开发了一组计算模型,并应用于 DrugBank 库的虚拟筛选活动。鉴定出属于集合模型适用域的 21 个命中物,并对纯化的多房棘球绦虫 FABP 进行了 3 个命中物的测定,实验证实了模型的预测。值得注意的是,这是我们首次报道分离和纯化此类 4 种 FABP 的报告,这里报告了它们的初步结构和功能特征。

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