Hentrich Thomas, Koch André, Weber Nico, Kilzheimer Alexander, Maia Ana, Burkhardt Simone, Rall Katharina, Casadei Nicolas, Kohlbacher Oliver, Riess Olaf, Schulze-Hentrich Julia Maria, Brucker Sara Yvonne
Institute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, Germany.
Department of Obstetrics and Gynecology, University of Tübingen, Tübingen, Germany.
Front Cell Dev Biol. 2020 Sep 24;8:572281. doi: 10.3389/fcell.2020.572281. eCollection 2020.
The Mayer-Rokitansky-Küster-Hauser (MRKH) syndrome (OMIM 277000) is characterized by agenesis of the uterus and upper part of the vagina in females with normal ovarian function. While genetic causes have been identified for a small subset of patients and epigenetic mechanisms presumably contribute to the pathogenic unfolding, too, the etiology of the syndrome has remained largely enigmatic. A comprehensive understanding of gene activity in the context of the disease is crucial to identify etiological components and their potential interplay. So far, this understanding is lacking, primarily due to the scarcity of samples and suitable tissue. In order to close this gap, we profiled endometrial tissue of uterus rudiments in a large cohort of MRKH patients using RNA-seq and thereby provide a genome-wide view on the altered transcription landscape of the MRKH syndrome. Differential and co-expression analyses of the data identified cellular processes and candidate genes that converge on a core network of interconnected regulators that emerge as pivotal for the perturbed expression space. With these results and browsable access to the rich data through an online tool we seek to accelerate research to unravel the underlying biology of the syndrome.
迈耶-罗基坦斯基-库斯特-豪泽(MRKH)综合征(OMIM 277000)的特征是女性子宫和阴道上段发育不全,而卵巢功能正常。虽然已确定一小部分患者的遗传病因,并且表观遗传机制可能也促成了疾病的发生,但该综合征的病因在很大程度上仍然不明。在疾病背景下全面了解基因活性对于确定病因成分及其潜在相互作用至关重要。到目前为止,由于样本和合适组织的稀缺,尚缺乏这种了解。为了填补这一空白,我们使用RNA测序对一大群MRKH患者的子宫残基的子宫内膜组织进行了分析,从而提供了关于MRKH综合征转录景观改变的全基因组视图。对数据的差异表达分析和共表达分析确定了细胞过程和候选基因,这些过程和基因汇聚在一个相互关联的调节因子核心网络上,这些调节因子对于扰动的表达空间至关重要。通过这些结果以及通过在线工具对丰富数据的可浏览访问,我们力求加速研究以揭示该综合征的潜在生物学机制。