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金黄色葡萄球菌 ST45 的全球流行病学与进化史。

Global Epidemiology and Evolutionary History of Staphylococcus aureus ST45.

机构信息

Institute of Hygiene, University Hospital Münster, Münster, Germany.

Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.

出版信息

J Clin Microbiol. 2020 Dec 17;59(1). doi: 10.1128/JCM.02198-20.

Abstract

ST45 is a major global MRSA lineage with huge strain diversity and a high clinical impact. It is one of the most prevalent carrier lineages but also frequently causes severe invasive disease, such as bacteremia. Little is known about its evolutionary history. In this study, we used whole-genome sequencing to analyze a large collection of 451 diverse ST45 isolates from 6 continents and 26 countries. -assembled genomes were used to understand genomic plasticity and to perform coalescent analyses. The ST45 population contained two distinct sublineages, which correlated with the isolates' geographical origins. One sublineage primarily consisted of European/North American isolates, while the second sublineage primarily consisted of African and Australian isolates. Bayesian analysis predicted ST45 originated in northwestern Europe about 500 years ago. Isolation time, host, and clinical symptoms did not correlate with phylogenetic groups. Our phylogenetic analyses suggest multiple acquisitions of the SCC element and key virulence factors throughout the evolution of the ST45 lineage.

摘要

ST45 是一个主要的全球耐甲氧西林金黄色葡萄球菌(MRSA)谱系,具有巨大的菌株多样性和高临床影响。它是最普遍的携带谱系之一,但也经常导致严重的侵袭性疾病,如菌血症。关于它的进化历史知之甚少。在这项研究中,我们使用全基因组测序分析了来自六大洲 26 个国家的 451 个不同 ST45 分离株的大型集合。-组装的基因组用于了解基因组的可塑性并进行合并分析。ST45 群体包含两个不同的亚谱系,这与分离株的地理起源相关。一个亚谱系主要由欧洲/北美分离株组成,而第二个亚谱系主要由非洲和澳大利亚分离株组成。贝叶斯分析预测 ST45 大约在 500 年前起源于西北欧。分离时间、宿主和临床症状与系统发育群无关。我们的系统发育分析表明,在 ST45 谱系的进化过程中,SCC 元件和关键毒力因子多次被获得。

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