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西西伯利亚地区牛白血病病毒 env 基因的基因型多样性。

Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia.

机构信息

Laboratory of Enzyme Analysis and DNA Technologies, Novosibirsk State Agricultural University, Novosibirsk, Russia.

Laboratory of Leukemia, Institute of experimental veterinary medicine, Siberia and the Far East, Siberian Federal Research Centre for Agrobiotechnology of the Russian Academy of Sciences, Krasnoobsk, Novosibirsk region, Russia.

出版信息

BMC Genet. 2020 Oct 22;21(Suppl 1):70. doi: 10.1186/s12863-020-00874-y.

Abstract

BACKGROUND

This study describes the biodiversity and properties of Bovine leukemia virus in Western Siberia. This paper explores the effect of different genotypes of the env gene of the cattle leukemia virus on hematological parameters of infected animals. The researchers focused on exploring the polymorphism of the env gene and, in doing so, discovered the new genotypes I and I, which differ from genotype I. Several hypotheses on the origin of the different genotypes in Siberia are discussed.

RESULTS

We obtained varying length of the restriction fragments for genotypes I Additionally using restrictase Hae III were received fragments was named genotype I, and genotype I. There are 2.57 ± 0.55% (20 out of 779) samples of genotype I which does not differ significantly from 1% (χ = 2.46). Other genotypes were observed in the cattle of Siberia as wild type genotypes (their frequency varied from 17.84 to 32.73%). The maximum viral load was observed in animals with the II and IV viral genotypes (1000-1400 viral particles per 1000 healthy cells), and the minimum viral load was observed animals with genotype I (from 700 to 900 viral particles per 1000 healthy cells).

CONCLUSIONS

The probability of the direct introduction of genotype II from South America to Siberia is extremely small and it is more likely that the strain originated independently in an autonomous population with its distribution also occurring independently. A new variety of genotype I (I) was found, which can be both a neoplasm and a relict strain.

摘要

背景

本研究描述了西伯利亚西部牛白血病病毒的生物多样性和特性。本文探讨了牛白血病病毒 env 基因的不同基因型对感染动物血液学参数的影响。研究人员专注于探索 env 基因的多态性,在此过程中发现了新的基因型 I 和 I,它们与基因型 I 不同。本文还讨论了西伯利亚不同基因型起源的几种假设。

结果

我们获得了不同长度的基因型 I 的限制片段。此外,使用限制酶 Hae III 得到的片段被命名为基因型 I 和 I。有 2.57 ± 0.55%(20 例/779 例)的基因型 I 样本与 1%无显著差异(χ = 2.46)。在西伯利亚的牛中还观察到其他野生型基因型(其频率从 17.84%到 32.73%不等)。在具有 II 和 IV 病毒基因型的动物中观察到最大的病毒载量(每 1000 个健康细胞中有 1000-1400 个病毒颗粒),而在具有基因型 I 的动物中观察到最小的病毒载量(每 1000 个健康细胞中有 700-900 个病毒颗粒)。

结论

基因型 II 从南美洲直接传入西伯利亚的可能性极小,更有可能是在一个独立的、自主的种群中独立起源的,其分布也可能是独立的。发现了一种新的基因型 I(I),它既可以是肿瘤株,也可以是遗迹株。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9c/7586112/8d82d9f92a25/12863_2020_874_Fig1_HTML.jpg

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