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比较分析孕妇和非孕妇阴道微生物菌群的差异,并分离针对粪肠球菌、屎肠球菌和福氏志贺菌的噬菌体。

Comparative analysis of Bacterial Vaginosis microbiota among pregnant and non-pregnant females and isolation of phages against Enterococcus faecalis, Enterococcus faecium, and Shigella flexneri strains.

机构信息

Department of Healthcare Biotechnology, Atta- Ur- Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.

Department of Healthcare Biotechnology, Atta- Ur- Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.

出版信息

Microb Pathog. 2020 Dec;149:104588. doi: 10.1016/j.micpath.2020.104588. Epub 2020 Oct 22.

Abstract

BACKGROUND AND OBJECTIVES

Bacterial vaginosis (BV) is the most common vaginal infection in women of reproductive age. It shifts the paradigms of the vagina from healthy, beneficial microbiota to facultative and strict anaerobes. BV remains one of the most arduous and controversial challenges in modern-day clinical microbiology because of its high prevalence and relapse rates. A lot of research has been carried out on it. Still, its etiology is unknown, which gave this infection global importance. The current study was designed to investigate and compare the microbiota of pregnant and non-pregnant females suffering from BV, and phages were isolated against BV microbiota.

MATERIAL AND METHODS

The samples were collected from the vagina by using a speculum, and swabs were streaked on different media to isolate bacteria. The microbiological analysis was performed by microscopy, biochemical testing, and antibiotic susceptibility was determined by using Metronidazole and Clindamycin. Furthermore, the phages were isolated and characterized against BV strains.

RESULTS AND CONCLUSION

The Gram staining showed high prevalence of Staphylococcus (36% vs. 33%), followed by Streptococcus (31% vs. 14%) and Enterococcus (7% vs. 14%) in non-pregnant and pregnant females' respectively. However, the exception was observed in non-pregnant BV positive females, who had Shigella flexneri in their samples. The antibiotic sensitivity showed Metronidazole was resistant against all BV microbiota, and Clindamycin showed susceptibility against 3 strains. Phages were isolated against three bacterial strains, i.e. E. faecalis, E. faecium, and S. flexneri. Bacterial reduction assay showed bacterial growth decreases in the presence of phage suspension, pH stability showed phages' maximum lytic activity at pH 7 for E. faecalis and E. faecium and pH 9 for S. flexneri. However, the thermal stability showed phages' highest lytic activity at 55 °C for E. faecalis, 70 °C for E. faecium, and 40 °C for S. flexneri. Phage genome isolation showed that all phages nucleic acid was DNA in nature and between 15 and 20kbp. SEM analysis showed they were circular in shape and might belong to the Podoviridae family. This study provides an understanding of pathogens involved in BV and helps the doctors to treat the patients accordingly. Furthermore, this study showed that Bacterial Vaginosis and BV secondary bacteria have associations. BV secondary microbiota is also involved in the pathogenesis of this infection, whereas bacteriophage therapy has the potential to be used as an alternative treatment to antibiotics.

摘要

背景与目的

细菌性阴道病(BV)是育龄妇女最常见的阴道感染。它将阴道的范式从健康有益的微生物群转变为兼性和严格的厌氧菌。由于其高患病率和复发率,BV 仍然是现代临床微生物学中最艰巨和最具争议的挑战之一。尽管已经进行了大量研究,但它的病因仍不清楚,这使得这种感染具有全球性意义。本研究旨在调查和比较患有 BV 的孕妇和非孕妇的微生物群,并针对 BV 微生物群分离噬菌体。

材料与方法

使用窥阴器从阴道采集样本,并将拭子涂抹在不同的培养基上以分离细菌。通过显微镜、生化检测进行微生物分析,并使用甲硝唑和克林霉素测定抗生素敏感性。此外,还针对 BV 菌株分离和表征了噬菌体。

结果与结论

革兰氏染色显示,非孕妇和孕妇的葡萄球菌(36%对 33%)、链球菌(31%对 14%)和肠球菌(7%对 14%)的患病率较高。然而,在非孕妇 BV 阳性女性中观察到例外,她们的样本中存在福氏志贺菌。抗生素敏感性显示甲硝唑对所有 BV 微生物群均有耐药性,克林霉素对 3 株有敏感性。针对 3 株细菌,即粪肠球菌、屎肠球菌和福氏志贺菌,分离出噬菌体。细菌减少测定显示在噬菌体悬浮液存在的情况下细菌生长减少,pH 稳定性显示 pH7 时对粪肠球菌和屎肠球菌以及 pH9 时对福氏志贺菌的噬菌体最大裂解活性。然而,热稳定性显示噬菌体在 55°C 时对粪肠球菌、70°C 时对屎肠球菌和 40°C 时对福氏志贺菌的裂解活性最高。噬菌体基因组分离显示所有噬菌体的核酸均为 DNA,大小在 15 到 20kbp 之间。SEM 分析显示它们呈圆形,可能属于肌尾噬菌体科。本研究提供了对参与 BV 的病原体的理解,并帮助医生相应地治疗患者。此外,本研究表明细菌性阴道病和 BV 继发性细菌之间存在关联。BV 继发性微生物群也参与了这种感染的发病机制,而噬菌体治疗有可能被用作抗生素的替代治疗方法。

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