基于癌症基因组图谱数据库分析 hsa-miR-147b 在肺鳞癌中的作用及调控机制。
Analysis of the Role and Regulation Mechanism of hsa-miR-147b in Lung Squamous Cell Carcinoma Based on The Cancer Genome Atlas Database.
机构信息
Department of General Medicine, Affiliated Hospital of Zunyi Medical University, Zunyi, China.
Department of Thoracic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, China.
出版信息
Cancer Biother Radiopharm. 2021 Apr;36(3):280-291. doi: 10.1089/cbr.2020.4187. Epub 2020 Oct 28.
This study aimed to explore the role and regulatory mechanism of hsa-miR-147b in lung squamous cell carcinoma (LUSC) through The Cancer Genome Atlas (TCGA) database. The expression and clinical value of miR-147b in LUSC were analyzed in the TCGA database. The target genes of miR-147b were screened via miRWalk 2.0 and verified in TCGA database. Gene ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed to analyzed the differential target genes of miR-147b. Kaplan-Meier survival analysis and Cox regression were used to screen the prognosis-related target genes. The expression of miR-147b in LUSC tissues increased, and was associated with poor prognosis, gender, and stage of LUSC patients. The area under the curve (AUC) of miR-147b was 0.8478 by the receiver-operating characteristic curve. There were 428 differentially expressed genes of miR-147b that played a critical role in drug transport, DNA binding, calcium signaling pathway, and Ras signaling pathway through GO and KEGG. , , , , , and were independent risk factors for poor prognosis in LUSC patients. LUSC patients in the high-risk group had a higher risk of death. The time-dependent AUC was 0.673. MiR-147b might be a potential molecular marker for poor prognosis in patients with LUSC.
本研究旨在通过癌症基因组图谱(TCGA)数据库探讨 hsa-miR-147b 在肺鳞状细胞癌(LUSC)中的作用和调控机制。在 TCGA 数据库中分析了 miR-147b 在 LUSC 中的表达和临床价值。通过 miRWalk 2.0 筛选 miR-147b 的靶基因,并在 TCGA 数据库中进行验证。对差异表达的 miR-147b 靶基因进行基因本体论(GO)注释和京都基因与基因组百科全书(KEGG)分析。Kaplan-Meier 生存分析和 Cox 回归筛选与预后相关的靶基因。miR-147b 在 LUSC 组织中的表达增加,与 LUSC 患者的预后、性别和分期有关。miR-147b 的曲线下面积(AUC)通过受试者工作特征曲线为 0.8478。通过 GO 和 KEGG,发现有 428 个差异表达的 miR-147b 靶基因,这些靶基因在药物转运、DNA 结合、钙信号通路和 Ras 信号通路中发挥着关键作用。、、、、和是 LUSC 患者预后不良的独立危险因素。LUSC 患者高危组的死亡风险更高。时间依赖性 AUC 为 0.673。miR-147b 可能是 LUSC 患者预后不良的潜在分子标志物。