Suppr超能文献

水平基因转移进化障碍的实验测定。

Experimental determination of evolutionary barriers to horizontal gene transfer.

机构信息

Institute of Integrative Biology, Functional and Comparative Genomics, University of Liverpool, Liverpool, L69 7ZB, UK.

Present Address: Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, 73019, USA.

出版信息

BMC Microbiol. 2020 Oct 28;20(1):326. doi: 10.1186/s12866-020-01983-5.

Abstract

BACKGROUND

Horizontal gene transfer, the acquisition of genes across species boundaries, is a major source of novel phenotypes that enables microbes to rapidly adapt to new environments. How the transferred gene alters the growth - fitness - of the new host affects the success of the horizontal gene transfer event and how rapidly the gene spreads in the population. Several selective barriers - factors that impact the fitness effect of the transferred gene - have been suggested to impede the likelihood of horizontal transmission, however experimental evidence is scarce. The objective of this study was to determine the fitness effects of orthologous genes transferred from Salmonella enterica serovar Typhimurium to Escherichia coli to identify the selective barriers using highly precise experimental measurements.

RESULTS

We found that most gene transfers result in strong fitness costs. Previously identified evolutionary barriers - gene function and the number of protein-protein interactions - did not predict the fitness effects of transferred genes. In contrast, dosage sensitivity, gene length, and the intrinsic protein disorder significantly impact the likelihood of a successful horizontal transfer.

CONCLUSION

While computational approaches have been successful in describing long-term barriers to horizontal gene transfer, our experimental results identified previously underappreciated barriers that determine the fitness effects of newly transferred genes, and hence their short-term eco-evolutionary dynamics.

摘要

背景

水平基因转移,即跨越物种界限获取基因,是产生新表型的主要来源,使微生物能够快速适应新环境。转移基因如何改变新宿主的生长适应性会影响水平基因转移事件的成功以及基因在种群中传播的速度。已经提出了几种选择障碍(影响转移基因适应性的因素)来阻碍水平传播的可能性,然而实验证据却很少。本研究的目的是确定从肠炎沙门氏菌 Typhimurium 转移到大肠杆菌的同源基因的适应性效应,以利用高度精确的实验测量来确定选择障碍。

结果

我们发现大多数基因转移都会导致强烈的适应性成本。先前确定的进化障碍——基因功能和蛋白质-蛋白质相互作用的数量——不能预测转移基因的适应性效应。相比之下,剂量敏感性、基因长度和固有蛋白质无序性显著影响成功水平转移的可能性。

结论

虽然计算方法在描述水平基因转移的长期障碍方面取得了成功,但我们的实验结果确定了以前被低估的障碍,这些障碍决定了新转移基因的适应性效应,从而决定了它们的短期生态进化动态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e16/7592521/83b5e76787ba/12866_2020_1983_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验