The Key Laboratory of Plant Resources Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-Bioengineering and College of Life Sciences, Guizhou University, Guiyang 550025, China.
Agricultural College, Guizhou University, Guiyang 550025, China.
Genes (Basel). 2020 Oct 28;11(11):1269. doi: 10.3390/genes11111269.
Plants have evolved a number of defense and adaptation responses to protect themselves against challenging environmental stresses. Genes containing a heavy metal associated (HMA) domain are required for the spatiotemporal transportation of metal ions that bind with various enzymes and co-factors within the cell. To uncover the underlying mechanisms mediated by genes, we identified 36 gene members in the StHMA family and divided them into six subfamilies by phylogenetic analysis. The s had high collinearity and were segmentally duplicated. Structurally, most StHMAs had one HMA domain, StHIPPc and StRNA1 subfamilies had two, and 13 StHMAs may be genetically variable. The StHMA gene structures and motifs varied considerably among the various classifications, this suggests the StHMA family is diverse in genetic functions. The promoter analysis showed that the s had six main cis-acting elements with abiotic stress. An expression pattern analysis revealed that the s were expressed tissue specifically, and a variety of abiotic stresses may induce the expression of StHMA family genes. The HMA transporter family may be regulated and expressed by a series of complex signal networks under abiotic stress. The results of this study may help to establish a theoretical foundation for further research investigating the functions of HMA genes in to elucidate their regulatory role in the mechanism governing the response of plants to abiotic stress.
植物已经进化出许多防御和适应反应,以保护自己免受挑战性的环境压力。含有重金属相关(HMA)结构域的基因是金属离子在细胞内与各种酶和辅助因子结合的时空运输所必需的。为了揭示基因介导的潜在机制,我们在 StHMA 家族中鉴定了 36 个基因成员,并通过系统发育分析将它们分为六个亚家族。StHMA 具有高度的共线性,并发生了片段复制。结构上,大多数 StHMAs 只有一个 HMA 结构域,StHIPPc 和 StRNA1 亚家族有两个,而 13 个 StHMAs 可能在遗传上是可变的。StHMA 基因结构和基序在各种分类中差异很大,这表明 StHMA 家族在遗传功能上是多样化的。启动子分析表明,StHMA 具有六个主要的顺式作用元件,与非生物胁迫有关。表达模式分析表明,StHMA 基因在组织中特异性表达,多种非生物胁迫可能诱导 StHMA 家族基因的表达。HMA 转运蛋白家族可能受到一系列复杂信号网络的调节和表达,以应对非生物胁迫。本研究的结果可能有助于为进一步研究 HMA 基因在植物中的功能建立理论基础,以阐明其在调控植物对非生物胁迫反应机制中的调节作用。