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ORMDL1 在不同癌症中的表达模式和预后价值。

Expression Patterns and Prognostic Values of ORMDL1 in Different Cancers.

机构信息

Peking University Third Hospital, 49 Huayuan North Road, Beijing 100191, China.

出版信息

Biomed Res Int. 2020 Oct 21;2020:5178397. doi: 10.1155/2020/5178397. eCollection 2020.

Abstract

The mammalian orosomucoid-like gene family (), containing , , and , is the important regulator of sphingolipid metabolism, which is relevant to cell growth, proliferation, migration, and invasion. Since the role of in cancers remained unclear, the main purpose of our study was to explore the expression patterns and prognostic values of in different tumors, especially in cholangiocarcinoma (CHOL), lymphoid neoplasm diffuse large B cell lymphoma (DLBCL), acute myeloid leukemia (LAML), and thymoma (THYM). Bioinformatics tools including GEPIA, CCLE, LinkedOmics, cBioPortal, and TIMER databases were used. As a result, the expression levels of in tumor tissues and normal tissues varied in different cancers, especially significantly upregulated in CHOL, DLBCL, LAML, and THYM. Moreover, mRNA was also highly expressed in cell lines of DLBCL and LAML. Further studies showed that overexpression was associated with poor prognosis in DLBCL, but not significant in CHOL, LAML, and THYM. Consistently, there were genetic alterations of in DLBCL, and patients with genetic alterations indicated worse survival. Coexpressed genes and related biological events with in DLBCL were found via LinkedOmics, Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. The relationship between and cancer immune cells was investigated, and expression was positively correlated with infiltrating levels of B cells. In conclusion, 1 is suggested to be a tumorigenic factor and considered as the potential therapeutic target and prognostic biomarker in DLBCL.

摘要

哺乳动物粘蛋白样基因家族()包含、、和,是调控神经酰胺代谢的重要调节因子,与细胞生长、增殖、迁移和侵袭有关。由于在癌症中的作用尚不清楚,本研究的主要目的是探讨在不同肿瘤中的表达模式和预后价值,特别是在胆管癌(CHOL)、淋巴母细胞性弥漫大 B 细胞淋巴瘤(DLBCL)、急性髓系白血病(LAML)和胸腺瘤(THYM)中。使用了包括 GEPIA、CCLE、LinkedOmics、cBioPortal 和 TIMER 数据库在内的生物信息学工具。结果表明,在不同癌症中,的表达水平在肿瘤组织和正常组织中存在差异,特别是在 CHOL、DLBCL、LAML 和 THYM 中显著上调。此外,在 DLBCL 和 LAML 的细胞系中也高度表达了 mRNA。进一步的研究表明,在 DLBCL 中,过表达与预后不良相关,但在 CHOL、LAML 和 THYM 中不显著。一致地,在 DLBCL 中存在的基因改变,并且具有遗传改变的患者的生存情况更差。通过 LinkedOmics、基因本体论(GO)和京都基因与基因组百科全书(KEGG)分析发现了与 DLBCL 中相关的共表达基因和相关生物学事件。还研究了与癌症免疫细胞的关系,结果表明表达与 B 细胞浸润水平呈正相关。总之,认为 1 是一种致癌因子,并可作为 DLBCL 潜在的治疗靶点和预后生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b21f/7596526/cec1019121b4/BMRI2020-5178397.001.jpg

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