Suppr超能文献

一株来自湿地的兼性甲烷氧化细菌菌株的基因组和生理特性

Genomic and Physiological Properties of a Facultative Methane-Oxidizing Bacterial Strain of sp. from a Wetland.

作者信息

Jung Gi-Yong, Rhee Sung-Keun, Han Young-Soo, Kim So-Jeong

机构信息

Geologic Environment Research Division, Korea Institute of Geoscience and Mineral Resources, Daejeon 34132, Korea.

Department of Microbiology, Chungbuk National University, Cheongju 28644, Korea.

出版信息

Microorganisms. 2020 Nov 2;8(11):1719. doi: 10.3390/microorganisms8111719.

Abstract

Methane-oxidizing bacteria are crucial players in controlling methane emissions. This study aimed to isolate and characterize a novel wetland methanotroph to reveal its role in the wetland environment based on genomic information. Based on phylogenomic analysis, the isolated strain, designated as B8, is a novel species in the genus . Strain B8 grew in a temperature range of 15 °C to 37 °C (optimum 30-35 °C) and a pH range of 6.5 to 10 (optimum 8.5-9). Methane, methanol, and acetate were used as carbon sources. Hydrogen was produced under oxygen-limited conditions. The assembled genome comprised of 3.39 Mbp and 59.9 mol% G + C content. The genome contained two types of particulate methane monooxygenases (pMMO) for low-affinity methane oxidation (pMMO1) and high-affinity methane oxidation (pMMO2). It was revealed that strain B8 might survive atmospheric methane concentration. Furthermore, the genome had various genes for hydrogenase, nitrogen fixation, polyhydroxybutyrate synthesis, and heavy metal resistance. This metabolic versatility of strain B8 might enable its survival in wetland environments.

摘要

甲烷氧化细菌是控制甲烷排放的关键因素。本研究旨在分离并鉴定一种新型湿地甲烷氧化菌,以便基于基因组信息揭示其在湿地环境中的作用。基于系统发育基因组分析,分离出的菌株命名为B8,是该属中的一个新物种。菌株B8在15℃至37℃(最适温度30 - 35℃)和pH值6.5至10(最适pH值8.5 - 9)的范围内生长。甲烷、甲醇和乙酸盐用作碳源。在氧气受限条件下会产生氢气。组装后的基因组由339万个碱基对组成,G + C含量为59.9摩尔%。该基因组包含两种类型的颗粒甲烷单加氧酶(pMMO),分别用于低亲和力甲烷氧化(pMMO1)和高亲和力甲烷氧化(pMMO2)。研究表明菌株B8可能在大气甲烷浓度下存活。此外,该基因组具有多种与氢化酶、固氮、聚羟基丁酸酯合成和重金属抗性相关的基因。菌株B8的这种代谢多样性可能使其能够在湿地环境中生存。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b29/7716213/0be68a46bd34/microorganisms-08-01719-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验