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塞尔维亚 983 人个体 22 个常染色体 STR 基因座的等位基因频率和法医学参数与 24 个其他群体的比较。

Allele frequencies and forensic parameters of 22 autosomal STR loci in a population of 983 individuals from Serbia and comparison with 24 other populations.

机构信息

Institute of Legal Medicine, Niš, Republic of Serbia.

Faculty of Science and Mathematics, Department of Biology and Ecology, University of Niš, Niš, Republic of Serbia.

出版信息

Ann Hum Biol. 2020 Dec;47(7-8):632-641. doi: 10.1080/03014460.2020.1846784. Epub 2020 Nov 23.

Abstract

BACKGROUND

Analysis of allele frequencies of short tandem repeat (STR) loci in ethnically diverse populations is essential for forensic reference database construction and studies on population genetics.

AIM

To analyse genetic polymorphisms of 22 autosomal STR loci in the Serbian population and to compare them with previously published data from some European and Turkish populations.

SUBJECTS AND METHODS

The study was conducted among 983 unrelated individuals from Serbia. Genotyping was performed using the PowerPlex Fusion amplification kit. Allele frequencies and forensic parameters were calculated using FORSTAT software. Interpopulation comparisons and genetic distance calculations were performed in Arlequin and POPTREEW software.

RESULTS

A total of 280 alleles were detected with corresponding allelic frequencies ranging from 0.0005 to 0.5255. Based on heterozygosity and the polymorphism information content, D1S1656 and Penta E may be considered as the most informative markers. Both the combined power of discrimination (CPD) and the combined power of exclusion (CPE) for the 22 analysed loci were higher than 0.999999. The combined match probability (CPM) for all 22 loci was 6.773688e.

CONCLUSION

With respect to the results, the 22 STR loci are highly polymorphic and discriminating in the Serbian population and could be used for forensic practice and population genetics studies.

摘要

背景

分析不同种族人群中短串联重复(STR)基因座的等位基因频率对于法医参考数据库的构建和群体遗传学研究至关重要。

目的

分析塞尔维亚人群中 22 个常染色体 STR 基因座的遗传多态性,并与一些欧洲和土耳其人群的已发表数据进行比较。

对象与方法

本研究在塞尔维亚的 983 名无关个体中进行。使用 PowerPlex Fusion 扩增试剂盒进行基因分型。使用 FORSTAT 软件计算等位基因频率和法医参数。使用 Arlequin 和 POPTREEW 软件进行群体间比较和遗传距离计算。

结果

共检测到 280 个等位基因,相应的等位基因频率范围为 0.0005 至 0.5255。基于杂合度和多态信息含量,D1S1656 和 Penta E 可被视为最具信息量的标记。22 个分析基因座的组合鉴别能力(CPD)和组合排除能力(CPE)均高于 0.999999。所有 22 个基因座的组合匹配概率(CPM)为 6.773688e。

结论

就结果而言,22 个 STR 基因座在塞尔维亚人群中具有高度多态性和区分度,可用于法医实践和群体遗传学研究。

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