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苜蓿根瘤菌nifN(fixF)基因是由nifA依赖性启动子调控的操纵子的一部分,编码一种与nifK基因产物同源的多肽。

Rhizobium meliloti nifN (fixF) gene is part of an operon regulated by a nifA-dependent promoter and codes for a polypeptide homologous to the nifK gene product.

作者信息

Aguilar O M, Reiländer H, Arnold W, Pühler A

机构信息

Lehrstuhl für Genetik, Fakultät für Biologie, Universität Bielefeld, Federal Republic of Germany.

出版信息

J Bacteriol. 1987 Dec;169(12):5393-400. doi: 10.1128/jb.169.12.5393-5400.1987.

DOI:10.1128/jb.169.12.5393-5400.1987
PMID:3316182
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC213963/
Abstract

An essential gene for symbiotic nitrogen fixation (fixF) is located near the common nodulation region of Rhizobium meliloti. A DNA fragment carrying fixF was characterized by hybridization with Klebsiella pneumoniae nif DNA and by nucleotide sequence analysis. The fixF gene was found to be related to K. pneumoniae nifN and was therefore renamed as the R. meliloti nifN gene. Upstream of the nifN coding region a second open reading frame was identified coding for a putative polypeptide of 110 amino acids (ORF110). By fragment-specific Tn5 mutagenesis it was shown that the nifN gene and ORF110 form an operon. The control region of this operon contains a nif promoter and also the putative nifA-binding sequence. For the deduced amino acid sequence of the nifN gene product a striking homology to the R. meliloti nifK protein was found. One cysteine residue and its adjacent amino acid sequence, which are highly conserved in the R. meliloti nifK, R. meliloti nifN, and K. pneumoniae nifN proteins, may play a role in binding the FeMo cofactor.

摘要

一个参与共生固氮的必需基因(fixF)位于苜蓿根瘤菌的共同结瘤区域附近。通过与肺炎克雷伯氏菌固氮基因DNA杂交以及核苷酸序列分析,对携带fixF的DNA片段进行了表征。发现fixF基因与肺炎克雷伯氏菌的nifN相关,因此将其重新命名为苜蓿根瘤菌的nifN基因。在nifN编码区上游鉴定出第二个开放阅读框,其编码一个由110个氨基酸组成的推定多肽(ORF110)。通过片段特异性Tn5诱变表明,nifN基因和ORF110形成一个操纵子。该操纵子的控制区包含一个固氮启动子以及推定的nifA结合序列。对于nifN基因产物的推导氨基酸序列,发现与苜蓿根瘤菌的nifK蛋白有显著同源性。在苜蓿根瘤菌的nifK、苜蓿根瘤菌的nifN和肺炎克雷伯氏菌的nifN蛋白中高度保守的一个半胱氨酸残基及其相邻氨基酸序列,可能在结合铁钼辅因子中起作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c4b1/213963/6fbc480264c0/jbacter00202-0072-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c4b1/213963/6fbc480264c0/jbacter00202-0072-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c4b1/213963/6fbc480264c0/jbacter00202-0072-a.jpg

相似文献

1
Rhizobium meliloti nifN (fixF) gene is part of an operon regulated by a nifA-dependent promoter and codes for a polypeptide homologous to the nifK gene product.苜蓿根瘤菌nifN(fixF)基因是由nifA依赖性启动子调控的操纵子的一部分,编码一种与nifK基因产物同源的多肽。
J Bacteriol. 1987 Dec;169(12):5393-400. doi: 10.1128/jb.169.12.5393-5400.1987.
2
Conservation of structure and location of Rhizobium meliloti and Klebsiella pneumoniae nifB genes.苜蓿中华根瘤菌和肺炎克雷伯氏菌固氮基因B的结构与位置保守性
J Bacteriol. 1987 Mar;169(3):1120-6. doi: 10.1128/jb.169.3.1120-1126.1987.
3
Characterization of a Rhizobium meliloti fixation gene (fixF) located near the common nodulation region.对位于常见结瘤区域附近的苜蓿根瘤菌固氮基因(fixF)的特性分析。
J Bacteriol. 1985 Oct;164(1):245-54. doi: 10.1128/jb.164.1.245-254.1985.
4
Genetic and structural analysis of the Rhizobium meliloti fixA, fixB, fixC, and fixX genes.苜蓿中华根瘤菌fixA、fixB、fixC和fixX基因的遗传与结构分析
J Bacteriol. 1987 Mar;169(3):1127-36. doi: 10.1128/jb.169.3.1127-1136.1987.
5
The Rhizobium meliloti fdxN gene encoding a ferredoxin-like protein is necessary for nitrogen fixation and is cotranscribed with nifA and nifB.编码类铁氧化还原蛋白的苜蓿中华根瘤菌fdxN基因对于固氮是必需的,并且与nifA和nifB共转录。
Mol Gen Genet. 1989 Apr;216(2-3):293-302. doi: 10.1007/BF00334368.
6
Nitrogen fixation specific regulatory genes of Klebsiella pneumoniae and Rhizobium meliloti share homology with the general nitrogen regulatory gene ntrC of K. pneumoniae.肺炎克雷伯菌和苜蓿根瘤菌的固氮特异性调控基因与肺炎克雷伯菌的一般氮调控基因ntrC具有同源性。
Nucleic Acids Res. 1985 Jun 25;13(12):4539-55. doi: 10.1093/nar/13.12.4539.
7
Sequence and structural organization of a nif A-like gene and part of a nifB-like gene of Herbaspirillum seropedicae strain Z78.巴西固氮螺菌Z78菌株中类nif A基因和部分类nif B基因的序列及结构组织
J Gen Microbiol. 1991 Jul;137(7):1511-22. doi: 10.1099/00221287-137-7-1511.
8
Klebsiella pneumoniae nifA product activates the Rhizobium meliloti nitrogenase promoter.肺炎克雷伯菌nifA产物激活苜蓿根瘤菌固氮酶启动子。
Nature. 1983 Feb 24;301(5902):728-32. doi: 10.1038/301728a0.
9
Nucleotide sequence of a 24,206-base-pair DNA fragment carrying the entire nitrogen fixation gene cluster of Klebsiella pneumoniae.
J Mol Biol. 1988 Oct 5;203(3):715-38. doi: 10.1016/0022-2836(88)90205-7.
10
In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex.关于RNA聚合酶-σ54与肺炎克雷伯菌和苜蓿根瘤菌nifH启动子相互作用的体内研究。NifA在开放启动子复合物形成中的作用。
J Mol Biol. 1989 Nov 5;210(1):65-77. doi: 10.1016/0022-2836(89)90291-x.

引用本文的文献

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Genome Biol. 2002;3(12):RESEARCH0076. doi: 10.1186/gb-2002-3-12-research0076. Epub 2002 Nov 26.
2
Increase in alfalfa nodulation, nitrogen fixation, and plant growth by specific DNA amplification in Sinorhizobium meliloti.通过苜蓿中华根瘤菌中的特定DNA扩增提高苜蓿的结瘤、固氮及植株生长。
Appl Environ Microbiol. 1999 Jun;65(6):2716-22. doi: 10.1128/AEM.65.6.2716-2722.1999.
3
Regulatory proteins and cis-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes.

本文引用的文献

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Azotobacter vinelandii nifD- and nifE-encoded polypeptides share structural homology.维氏固氮菌 nifD 和 nifE 编码的多肽具有结构同源性。
Proc Natl Acad Sci U S A. 1985 Sep;82(17):5720-3. doi: 10.1073/pnas.82.17.5720.
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Mapping of the protein-coding regions of Rhizobium meliloti common nodulation genes.苜蓿中华根瘤菌共有结瘤基因的蛋白质编码区图谱。
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The Rhodobacter capsulatus glnB gene is regulated by NtrC at tandem rpoN-independent promoters.荚膜红细菌的glnB基因由NtrC在串联的不依赖rpoN的启动子处进行调控。
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Genetic regulation of nitrogen fixation in rhizobia.根瘤菌中固氮作用的遗传调控
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Induction of nitrogen-fixing nodules on clover requires only 32 kilobase pairs of DNA from the Rhizobium trifolii symbiosis plasmid.在三叶草上诱导固氮根瘤仅需要来自三叶草根瘤菌共生质粒的32千碱基对的DNA。
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DNA sequence and genetic analysis of the Rhodobacter capsulatus nifENX gene region: homology between NifX and NifB suggests involvement of NifX in processing of the iron-molybdenum cofactor.荚膜红细菌nifENX基因区域的DNA序列及遗传分析:NifX与NifB之间的同源性表明NifX参与铁钼辅因子的加工过程。
Mol Gen Genet. 1989 Apr;216(2-3):353-63. doi: 10.1007/BF00334376.
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The Rhizobium meliloti fdxN gene encoding a ferredoxin-like protein is necessary for nitrogen fixation and is cotranscribed with nifA and nifB.编码类铁氧化还原蛋白的苜蓿中华根瘤菌fdxN基因对于固氮是必需的,并且与nifA和nifB共转录。
Mol Gen Genet. 1989 Apr;216(2-3):293-302. doi: 10.1007/BF00334368.
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Open reading frame 5 (ORF5), encoding a ferredoxinlike protein, and nifQ are cotranscribed with nifE, nifN, nifX, and ORF4 in Rhodobacter capsulatus.编码类铁氧化还原蛋白的开放阅读框5(ORF5)和nifQ,与荚膜红细菌中的nifE、nifN、nifX及ORF4共同转录。
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Plasmid insertion mutagenesis and lac gene fusion with mini-mu bacteriophage transposons.利用微小噬菌体转座子进行质粒插入诱变和乳糖操纵子基因融合
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