Salazar Karen, Nattier Romain
Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, 57 rue Cuvier, CP 50, 75005 Paris, France.
Grupo de Investigación Insectos de Colombia, Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Ciudad Universitaria, Bogotá 111321, Colombia.
Insects. 2020 Nov 6;11(11):766. doi: 10.3390/insects11110766.
Natural history collections house an important source of genetic data from yet unexplored biological diversity. Molecular data from museum specimens remain underexploited, which is mainly due to the degradation of DNA from specimens over time. However, Next-Generation Sequencing (NGS) technology can now be used to sequence "old" specimens. Indeed, many of these specimens are unique samples of nomenclatural types and can be crucial for resolving systematic or biogeographic scientific questions. Two ladybird beetle specimens from Patagonia corresponding to a new species of the genus Mulsant were found in the collections of the Muséum national d'Histoire naturelle (MNHN), Paris. Here, we describe Salazar, Total DNA of one of the two specimens was sequenced by NGS using a paired-end Illumina approach. We reconstruct and characterize the mitochondrial genome of this species (16,194 bp). Then, the protein-coding genes (PCGs) and ribosomal RNAs (rRNAs) were used to infer by maximum likelihood and Bayesian Inference the phylogenetic position of among 27 representatives of Coccinellidae. Phylogenetic analysis confirmed the position of as sister group to Crotch. Hence, we highlight the high potential of sequencing technology for extracting molecular information from old specimens, which are used here for the systematic study of a genus, while demonstrating the importance of preserving biological collections.
自然历史收藏保存着来自尚未探索的生物多样性的重要遗传数据来源。博物馆标本中的分子数据仍未得到充分利用,这主要是由于标本中的DNA随着时间推移而降解。然而,现在可以使用下一代测序(NGS)技术对“古老”标本进行测序。实际上,这些标本中有许多是命名模式的独特样本,对于解决系统发育或生物地理学科学问题可能至关重要。在巴黎国家自然历史博物馆(MNHN)的馆藏中发现了来自巴塔哥尼亚的两只瓢虫标本,它们属于Mulsant属的一个新物种。在此,我们描述了萨拉查,使用双端Illumina方法通过NGS对这两个标本中的一个进行了全基因组测序。我们重建并表征了该物种的线粒体基因组(16,194 bp)。然后,利用蛋白质编码基因(PCGs)和核糖体RNA(rRNAs),通过最大似然法和贝叶斯推断法,在瓢虫科的27个代表物种中推断出该物种的系统发育位置。系统发育分析证实了该物种作为Crotch姐妹群的位置。因此,我们强调了测序技术从古老标本中提取分子信息的巨大潜力,这里利用这些标本对一个属进行系统研究,同时展示了保存生物标本的重要性。