Division of Infection Control and Environmental Health, Norwegian Institute of Public Health, Oslo, Norway.
School of Life Sciences and Department of Statistics, University of Warwick, Coventry, UK.
Microb Genom. 2020 Dec;6(12). doi: 10.1099/mgen.0.000480. Epub 2020 Nov 17.
multilocus sequence type (ST)-7827 emerged in a dramatic fashion in Norway in the period 2016-2018. Here, we aim to shed light on the provenance and expansion of this ST. ST-7827 was found to be polyphyletic, but the majority of members belonged to a monophyletic clade we termed PopPUNK cluster 7827 (PC-7827). In Norway, both PC-7827 and ST-7827 isolates were almost exclusively isolated from men. Phylogeographical analyses demonstrated an Asian origin of the genogroup, with multiple inferred exports to Europe and the USA. The genogroup was uniformly resistant to fluoroquinolones, and associated with reduced susceptibility to both azithromycin and the extended-spectrum cephalosporins (ESCs) cefixime and ceftriaxone. From a genetic background including the allele 13.001, associated with reduced ESC susceptibility, we identified repeated events of acquisition of alleles associated with further reduction in ceftriaxone susceptibility. Transmission of the strain was significantly reduced in Norway in 2019, but our results indicate the existence of a recently established global reservoir. The worrisome drug-resistance profile and rapid emergence of PC-7827 calls for close monitoring of the situation.
多位点序列型(ST)-7827 于 2016 年至 2018 年期间在挪威急剧出现。在此,我们旨在阐明该 ST 的起源和传播。ST-7827 呈多系性,但大多数成员属于我们称为 PopPUNK 簇 7827(PC-7827)的单系群。在挪威,PC-7827 和 ST-7827 分离株几乎仅从男性中分离出来。系统地理学分析表明该基因群起源于亚洲,有多个推断的出口到欧洲和美国。该基因群对氟喹诺酮类药物具有一致的耐药性,并且与阿奇霉素和扩展谱头孢菌素(ESC)头孢克肟和头孢曲松的敏感性降低有关。从包括与 ESC 敏感性降低相关的 等位基因 13.001 的遗传背景中,我们确定了与头孢曲松敏感性进一步降低相关的 等位基因获得的反复事件。2019 年,该菌株在挪威的传播显著减少,但我们的结果表明存在最近建立的全球储存库。令人担忧的耐药谱和 PC-7827 的快速出现呼吁密切监测情况。