• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

Na 依赖性门控动力学和静电吸引确保谷氨酸转运体中的底物偶联。

Na-dependent gate dynamics and electrostatic attraction ensure substrate coupling in glutamate transporters.

机构信息

Institute of Biological Information Processing (IBI-1), Molekular- und Zellphysiologie, and JARA-HPC, Forschungszentrum Jülich, Jülich, Germany.

Institut de Biologie Structurale (IBS), Université Grenoble Alpes-CEA-CNRS, 38000 Grenoble, France.

出版信息

Sci Adv. 2020 Nov 18;6(47). doi: 10.1126/sciadv.aba9854. Print 2020 Nov.

DOI:10.1126/sciadv.aba9854
PMID:33208356
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7673805/
Abstract

Excitatory amino acid transporters (EAATs) harness [Na], [K], and [H] gradients for fast and efficient glutamate removal from the synaptic cleft. Since each glutamate is cotransported with three Na ions, [Na] gradients are the predominant driving force for glutamate uptake. We combined all-atom molecular dynamics simulations, fluorescence spectroscopy, and x-ray crystallography to study Na:substrate coupling in the EAAT homolog Glt A lipidic cubic phase x-ray crystal structure of wild-type, Na-only bound Glt at 2.5-Å resolution revealed the fully open, outward-facing state primed for subsequent substrate binding. Simulations and kinetic experiments established that only the binding of two Na ions to the Na1 and Na3 sites ensures complete HP2 gate opening via a conformational selection-like mechanism and enables high-affinity substrate binding via electrostatic attraction. The combination of Na-stabilized gate opening and electrostatic coupling of aspartate to Na binding provides a constant Na:substrate transport stoichiometry over a broad range of neurotransmitter concentrations.

摘要

兴奋性氨基酸转运体(EAATs)利用 [Na+]、[K+] 和 [H+] 梯度,从突触间隙快速有效地去除谷氨酸。由于每个谷氨酸与三个 Na+离子共转运,因此 [Na+] 梯度是谷氨酸摄取的主要驱动力。我们结合全原子分子动力学模拟、荧光光谱和 X 射线晶体学,研究了 EAAT 同系物 GltA 中的 Na:底物偶联。野生型脂质立方相 X 射线晶体结构中 Na 仅结合的 Glt 的分辨率为 2.5-Å,揭示了完全开放的、向外的状态,为随后的底物结合做好了准备。模拟和动力学实验表明,只有两个 Na 离子结合到 Na1 和 Na3 位点,才能通过构象选择样机制确保完全打开 HP2 门,并通过静电吸引实现高亲和力的底物结合。Na 稳定的门打开和天冬氨酸与 Na 结合的静电偶联的结合,在广泛的神经递质浓度范围内提供了恒定的 Na:底物转运计量比。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/d25e41a5f6de/aba9854-F6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/c40859098724/aba9854-F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/4015e8544a20/aba9854-F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/c46a26d65c31/aba9854-F3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/e3f07afe2fd9/aba9854-F4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/2defbfaff55c/aba9854-F5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/d25e41a5f6de/aba9854-F6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/c40859098724/aba9854-F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/4015e8544a20/aba9854-F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/c46a26d65c31/aba9854-F3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/e3f07afe2fd9/aba9854-F4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/2defbfaff55c/aba9854-F5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9715/7673805/d25e41a5f6de/aba9854-F6.jpg

相似文献

1
Na-dependent gate dynamics and electrostatic attraction ensure substrate coupling in glutamate transporters.Na 依赖性门控动力学和静电吸引确保谷氨酸转运体中的底物偶联。
Sci Adv. 2020 Nov 18;6(47). doi: 10.1126/sciadv.aba9854. Print 2020 Nov.
2
Distinct roles of the Na binding sites in the allosteric coupling mechanism of the glutamate transporter homolog, Glt.钠结合位点在谷氨酸转运体同源物Glt变构偶联机制中的不同作用
Proc Natl Acad Sci U S A. 2022 May 10;119(19):e2121653119. doi: 10.1073/pnas.2121653119. Epub 2022 May 4.
3
Opposite movement of the external gate of a glutamate transporter homolog upon binding cotransported sodium compared with substrate.谷氨酸转运体同源蛋白外门在结合共转运的钠离子时相对于底物发生相反的运动。
J Neurosci. 2011 Apr 20;31(16):6255-62. doi: 10.1523/JNEUROSCI.6096-10.2011.
4
Investigation of the allosteric coupling mechanism in a glutamate transporter homolog via unnatural amino acid mutagenesis.通过非天然氨基酸诱变研究谷氨酸转运体同源物的别构偶联机制。
Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):15939-15946. doi: 10.1073/pnas.1907852116. Epub 2019 Jul 22.
5
Molecular Basis of Coupled Transport and Anion Conduction in Excitatory Amino Acid Transporters.兴奋性氨基酸转运体中耦合转运和阴离子传导的分子基础。
Neurochem Res. 2022 Jan;47(1):9-22. doi: 10.1007/s11064-021-03252-x. Epub 2021 Feb 15.
6
The mechanism of substrate release by the aspartate transporter GltPh: insights from simulations.天冬氨酸转运体GltPh释放底物的机制:模拟研究的见解
Mol Biosyst. 2011 Mar;7(3):832-42. doi: 10.1039/c0mb00175a. Epub 2010 Dec 15.
7
Induced fit substrate binding to an archeal glutamate transporter homologue.诱导契合底物结合到古菌谷氨酸转运蛋白同源物上。
Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12486-91. doi: 10.1073/pnas.1300772110. Epub 2013 Jul 9.
8
Low Affinity and Slow Na+ Binding Precedes High Affinity Aspartate Binding in the Secondary-active Transporter GltPh.在二级主动转运蛋白GltPh中,低亲和力和缓慢的钠离子结合先于高亲和力的天冬氨酸结合。
J Biol Chem. 2015 Jun 26;290(26):15962-72. doi: 10.1074/jbc.M115.656876. Epub 2015 Apr 28.
9
Dynamics of the extracellular gate and ion-substrate coupling in the glutamate transporter.谷氨酸转运体中细胞外门控和离子-底物偶联的动力学
Biophys J. 2008 Sep;95(5):2292-300. doi: 10.1529/biophysj.108.133421. Epub 2008 May 30.
10
Identification of the third Na+ site and the sequence of extracellular binding events in the glutamate transporter.鉴定谷氨酸转运体中的第三个 Na+ 结合位点和细胞外结合事件的序列。
Biophys J. 2010 Sep 8;99(5):1416-25. doi: 10.1016/j.bpj.2010.06.052.

引用本文的文献

1
Evolutionary analysis reveals the origin of sodium coupling in glutamate transporters.进化分析揭示了谷氨酸转运体中钠偶联的起源。
Nat Struct Mol Biol. 2025 Aug 25. doi: 10.1038/s41594-025-01652-z.
2
NMDA receptors in neurodegenerative diseases: mechanisms and emerging therapeutic strategies.神经退行性疾病中的N-甲基-D-天冬氨酸受体:机制与新兴治疗策略
Front Aging Neurosci. 2025 Jul 24;17:1604378. doi: 10.3389/fnagi.2025.1604378. eCollection 2025.
3
Mechanism and Structure-Guided Optimization of SLC1A1/EAAT3-Selective Inhibitors in Kidney Cancer.

本文引用的文献

1
Increased glutamate transporter-associated anion currents cause glial apoptosis in episodic ataxia 6.谷氨酸转运体相关阴离子电流增加导致发作性共济失调6型中的胶质细胞凋亡。
Brain Commun. 2020 Mar 4;2(1):fcaa022. doi: 10.1093/braincomms/fcaa022. eCollection 2020.
2
Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.脂质纳米盘环境中谷氨酸转运蛋白同源物的结构组合。
Nat Commun. 2020 Feb 21;11(1):998. doi: 10.1038/s41467-020-14834-8.
3
Allosteric gate modulation confers K coupling in glutamate transporters.
肾癌中SLC1A1/EAAT3选择性抑制剂的作用机制及基于结构的优化
bioRxiv. 2025 Jul 7:2025.07.03.663021. doi: 10.1101/2025.07.03.663021.
4
Conformational free energy landscape of a glutamate transporter and microscopic details of its transport mechanism.谷氨酸转运体的构象自由能景观及其转运机制的微观细节。
Proc Natl Acad Sci U S A. 2025 Mar 11;122(10):e2416381122. doi: 10.1073/pnas.2416381122. Epub 2025 Mar 5.
5
Structural basis of the obligatory exchange mode of human neutral amino acid transporter ASCT2.人中性氨基酸转运蛋白 ASCT2 必需交换模式的结构基础。
Nat Commun. 2024 Aug 3;15(1):6570. doi: 10.1038/s41467-024-50888-8.
6
HS-AFM single-molecule structural biology uncovers basis of transporter wanderlust kinetics.HS-AFM 单分子结构生物学揭示了转运蛋白“流浪癖”动力学的基础。
Nat Struct Mol Biol. 2024 Aug;31(8):1286-1295. doi: 10.1038/s41594-024-01260-3. Epub 2024 Apr 17.
7
Ion and lipid orchestration of secondary active transport.离子和脂质对次级主动转运的调控。
Nature. 2024 Feb;626(8001):963-974. doi: 10.1038/s41586-024-07062-3. Epub 2024 Feb 28.
8
Structural basis of pH-dependent activation in a CLC transporter.一种 CLC 转运蛋白的 pH 依赖性激活的结构基础。
Nat Struct Mol Biol. 2024 Apr;31(4):644-656. doi: 10.1038/s41594-023-01210-5. Epub 2024 Jan 26.
9
Custom Design of a Humidifier Chamber for Crystallization.用于结晶的加湿器腔室的定制设计。
Cryst Growth Des. 2023 Dec 12;24(1):325-330. doi: 10.1021/acs.cgd.3c01034. eCollection 2024 Jan 3.
10
Evolutionary analysis reveals the origin of sodium coupling in glutamate transporters.进化分析揭示了谷氨酸转运体中钠偶联的起源。
bioRxiv. 2024 Apr 25:2023.12.03.569786. doi: 10.1101/2023.12.03.569786.
变构门控调节赋予谷氨酸转运体 K 偶联。
EMBO J. 2019 Oct 1;38(19):e101468. doi: 10.15252/embj.2019101468. Epub 2019 Sep 10.
4
Free-Energy Simulations Resolve the Low-Affinity Na-High-Affinity Asp Binding Paradox in Glt.自由能模拟解决了 Glt 中低亲和力 Na-高亲和力 Asp 结合悖论。
Biophys J. 2019 Aug 20;117(4):780-789. doi: 10.1016/j.bpj.2019.07.016. Epub 2019 Jul 19.
5
A one-gate elevator mechanism for the human neutral amino acid transporter ASCT2.一种用于人中性氨基酸转运蛋白 ASCT2 的单门电梯机制。
Nat Commun. 2019 Jul 31;10(1):3427. doi: 10.1038/s41467-019-11363-x.
6
Investigation of the allosteric coupling mechanism in a glutamate transporter homolog via unnatural amino acid mutagenesis.通过非天然氨基酸诱变研究谷氨酸转运体同源物的别构偶联机制。
Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):15939-15946. doi: 10.1073/pnas.1907852116. Epub 2019 Jul 22.
7
GROmaρs: A GROMACS-Based Toolset to Analyze Density Maps Derived from Molecular Dynamics Simulations.GROmaρs:基于 GROMACS 的工具集,用于分析来自分子动力学模拟的密度图。
Biophys J. 2019 Jan 8;116(1):4-11. doi: 10.1016/j.bpj.2018.11.3126. Epub 2018 Dec 1.
8
Kinetic mechanism of coupled binding in sodium-aspartate symporter GltPh.钠-天冬氨酸共转运体 GltPh 偶联结合的动力学机制。
Elife. 2018 Sep 26;7:e37291. doi: 10.7554/eLife.37291.
9
Developing force fields when experimental data is sparse: AMBER/GAFF-compatible parameters for inorganic and alkyl oxoanions.在实验数据稀少时开发力场:无机和烷基含氧阴离子的AMBER/GAFF兼容参数
Phys Chem Chem Phys. 2017 Aug 9;19(31):20593-20607. doi: 10.1039/c7cp02557b.
10
Induced Fit Is a Special Case of Conformational Selection.诱导契合是构象选择的一种特殊情况。
Biochemistry. 2017 Jun 6;56(22):2853-2859. doi: 10.1021/acs.biochem.7b00340. Epub 2017 May 22.