Lee Ming-Yue, Geiger James, Ishchenko Andrii, Han Gye Won, Barty Anton, White Thomas A, Gati Cornelius, Batyuk Alexander, Hunter Mark S, Aquila Andrew, Boutet Sébastien, Weierstall Uwe, Cherezov Vadim, Liu Wei
Center for Applied Structural Discovery at the Biodesign Institute, Arizona State University, Tempe, AZ 85287-1604, USA.
Bridge Institute, Michelson Center for Convergent Bioscience, University of Southern California, 1002 W. Childs Way, Los Angeles, CA 90089, USA.
IUCrJ. 2020 Oct 15;7(Pt 6):976-984. doi: 10.1107/S2052252520012701. eCollection 2020 Nov 1.
Serial femtosecond crystallography (SFX) with X-ray free-electron lasers (XFELs) has proven highly successful for structure determination of challenging membrane proteins crystallized in lipidic cubic phase; however, like most techniques, it has limitations. Here we attempt to address some of these limitations related to the use of a vacuum chamber and the need for attenuation of the XFEL beam, in order to further improve the efficiency of this method. Using an optimized SFX experimental setup in a helium atmosphere, the room-temperature structure of the adenosine A receptor (AAR) at 2.0 Å resolution is determined and compared with previous AAR structures determined in vacuum and/or at cryogenic temperatures. Specifically, the capability of utilizing high XFEL beam transmissions is demonstrated, in conjunction with a high dynamic range detector, to collect high-resolution SFX data while reducing crystalline material consumption and shortening the collection time required for a complete dataset. The experimental setup presented herein can be applied to future SFX applications for protein nanocrystal samples to aid in structure-based discovery efforts of therapeutic targets that are difficult to crystallize.
利用X射线自由电子激光(XFEL)的串行飞秒晶体学(SFX)已被证明在确定脂质立方相中结晶的具有挑战性的膜蛋白结构方面非常成功;然而,与大多数技术一样,它也有局限性。在这里,我们试图解决一些与使用真空室以及XFEL光束衰减需求相关的局限性,以进一步提高该方法的效率。在氦气氛围中使用优化的SFX实验装置,确定了腺苷A受体(AAR)在2.0 Å分辨率下的室温结构,并与之前在真空和/或低温下确定的AAR结构进行了比较。具体而言,展示了结合高动态范围探测器利用高XFEL光束传输的能力,以在减少晶体材料消耗并缩短完整数据集所需收集时间的同时收集高分辨率的SFX数据。本文介绍的实验装置可应用于未来针对蛋白质纳米晶体样品的SFX应用,以助力基于结构的难以结晶的治疗靶点发现工作。