• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一项关于选定有机硫化合物作为针对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)感染结合多个药物靶点的潜在药物的研究。

An study on selected organosulfur compounds as potential drugs for SARS-CoV-2 infection binding multiple drug targets.

作者信息

Thurakkal Liya, Singh Satyam, Roy Rajarshi, Kar Parimal, Sadhukhan Sushabhan, Porel Mintu

机构信息

Discipline of Chemistry, Indian Institute of Technology Palakkad, Kerala 678 557, India.

Discipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Madhya Pradesh 453 552, India.

出版信息

Chem Phys Lett. 2021 Jan 16;763:138193. doi: 10.1016/j.cplett.2020.138193. Epub 2020 Nov 15.

DOI:10.1016/j.cplett.2020.138193
PMID:33223560
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7666712/
Abstract

The emerging paradigm shift from 'one molecule, one target, for one disease' towards 'multi-targeted small molecules' has paved an ingenious pathway in drug discovery in recent years. We extracted this idea for the investigation of drugs for COVID-19. Perceiving the importance of organosulfur compounds, seventy-six known organosulfur compounds were screened and studied for the interaction with multiple SARS-CoV-2 target proteins by molecular dynamics simulation. Lurasidone and its derivatives displayed substantial binding affinity against five proteins (Mpro, PLpro, Spro, helicase and RdRp). The pharmacokinetics, ADMET properties and target prediction studies performed in this work further potentiates the effectiveness against SARS-CoV-2.

摘要

近年来,从“一种分子,一个靶点,针对一种疾病”到“多靶点小分子”的新兴范式转变为药物发现开辟了一条巧妙的途径。我们提取了这一理念用于研究治疗新冠肺炎的药物。鉴于有机硫化合物的重要性,通过分子动力学模拟筛选并研究了76种已知的有机硫化合物与多种新冠病毒靶点蛋白的相互作用。鲁拉西酮及其衍生物对五种蛋白质(Mpro、PLpro、Spro、解旋酶和RdRp)表现出显著的结合亲和力。这项工作中进行的药代动力学、ADMET性质和靶点预测研究进一步增强了对新冠病毒的有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/ea7c59d967b9/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/74fc5b0e00f4/ga1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/87862b0989c8/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/e265349a6670/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/d5c9d1d800a7/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/ea7c59d967b9/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/74fc5b0e00f4/ga1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/87862b0989c8/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/e265349a6670/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/d5c9d1d800a7/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2120/7666712/ea7c59d967b9/gr5_lrg.jpg

相似文献

1
An study on selected organosulfur compounds as potential drugs for SARS-CoV-2 infection binding multiple drug targets.一项关于选定有机硫化合物作为针对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)感染结合多个药物靶点的潜在药物的研究。
Chem Phys Lett. 2021 Jan 16;763:138193. doi: 10.1016/j.cplett.2020.138193. Epub 2020 Nov 15.
2
Phytocompounds as potential inhibitors of SARS-CoV-2 Mpro and PLpro through computational studies.通过计算研究,植物化合物作为严重急性呼吸综合征冠状病毒2(SARS-CoV-2)主蛋白酶(Mpro)和木瓜蛋白酶样蛋白酶(PLpro)的潜在抑制剂
Saudi J Biol Sci. 2022 May;29(5):3456-3465. doi: 10.1016/j.sjbs.2022.02.028. Epub 2022 Feb 25.
3
Identification of potential plant-based inhibitor against viral proteases of SARS-CoV-2 through molecular docking, MM-PBSA binding energy calculations and molecular dynamics simulation.通过分子对接、 MM-PBSA 结合能计算和分子动力学模拟鉴定潜在的植物源性 SARS-CoV-2 病毒蛋白酶抑制剂。
Mol Divers. 2021 Aug;25(3):1963-1977. doi: 10.1007/s11030-021-10211-9. Epub 2021 Apr 15.
4
Computational study of the therapeutic potentials of a new series of imidazole derivatives against SARS-CoV-2.针对 SARS-CoV-2 的一系列新型咪唑衍生物治疗潜力的计算研究。
J Pharmacol Sci. 2021 Sep;147(1):62-71. doi: 10.1016/j.jphs.2021.05.004. Epub 2021 May 23.
5
In Silico Study towards Repositioning of FDA-Approved Drug Candidates for Anticoronaviral Therapy: Molecular Docking, Molecular Dynamics and Binding Free Energy Calculations.计算机模拟研究:重新定位 FDA 批准的候选药物用于抗冠状病毒治疗:分子对接、分子动力学和结合自由能计算。
Molecules. 2022 Sep 14;27(18):5988. doi: 10.3390/molecules27185988.
6
investigation of spice molecules as potent inhibitor of SARS-CoV-2.研究香料分子作为 SARS-CoV-2 的有效抑制剂。
J Biomol Struct Dyn. 2022 Feb;40(2):860-874. doi: 10.1080/07391102.2020.1819879. Epub 2020 Sep 17.
7
Integrated Exploration of Pyranocoumarin Derivatives as Synergistic Inhibitors of Dual-target for Mpro and PLpro Proteins of SARS-CoV-2 through Molecular Docking, ADMET Analysis, and Molecular Dynamics Simulation.通过分子对接、ADMET分析和分子动力学模拟对吡喃香豆素衍生物作为新型冠状病毒Mpro和PLpro蛋白双靶点协同抑制剂进行综合探索
Curr Med Chem. 2024 Oct 3. doi: 10.2174/0109298673331781240829094334.
8
Repurposing of phytomedicine-derived bioactive compounds with promising anti-SARS-CoV-2 potential: Molecular docking, MD simulation and drug-likeness/ADMET studies.具有抗SARS-CoV-2潜力的植物药衍生生物活性化合物的重新利用:分子对接、分子动力学模拟及类药性质/药物代谢动力学、药物效应动力学和毒性研究
Saudi J Biol Sci. 2022 Apr;29(4):2432-2446. doi: 10.1016/j.sjbs.2021.12.018. Epub 2021 Dec 13.
9
Perceiving SARS-CoV-2 Mpro and PLpro dual inhibitors from pool of recognized antiviral compounds of endophytic microbes: an in silico simulation study.从内生微生物公认的抗病毒化合物库中筛选严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的M蛋白酶(Mpro)和木瓜蛋白酶样蛋白酶(PLpro)双重抑制剂:一项计算机模拟研究
Struct Chem. 2022;33(5):1619-1643. doi: 10.1007/s11224-022-01932-0. Epub 2022 Apr 8.
10
Discovery of Some Antiviral Natural Products to Fight Against Novel Coronavirus (SARS-CoV-2) Using an Approach.采用一种方法发现一些对抗新型冠状病毒(SARS-CoV-2)的抗病毒天然产物。
Comb Chem High Throughput Screen. 2021;24(8):1271-1280. doi: 10.2174/1386207323666200902135928.

引用本文的文献

1
4″-Alkyl EGCG Derivatives Induce Cytoprotective Autophagy Response by Inhibiting EGFR in Glioblastoma Cells.4″-烷基表没食子儿茶素没食子酸酯衍生物通过抑制胶质母细胞瘤细胞中的表皮生长因子受体诱导细胞保护性自噬反应。
ACS Omega. 2024 Jan 3;9(2):2286-2301. doi: 10.1021/acsomega.3c06110. eCollection 2024 Jan 16.
2
Silver Natural Asphalt Sulfonate (NA-SOAg): Fabrication and Utilization as a New Heterogeneous, Carbonaceous, and Retrievable Nanocatalyst for C(sp)- ( = C, S, and Se) Bond Formation.天然沥青银磺酸盐(NA-SOAg):作为一种用于形成C(sp)-(=C、S和Se)键的新型多相、含碳且可回收纳米催化剂的制备与应用
ACS Omega. 2023 Sep 22;8(39):36152-36161. doi: 10.1021/acsomega.3c04447. eCollection 2023 Oct 3.
3

本文引用的文献

1
Crystal structure of SARS-CoV-2 papain-like protease.严重急性呼吸综合征冠状病毒2型木瓜样蛋白酶的晶体结构
Acta Pharm Sin B. 2021 Jan;11(1):237-245. doi: 10.1016/j.apsb.2020.08.014. Epub 2020 Sep 2.
2
Potential inhibitors of SARS-cov-2 RNA dependent RNA polymerase protein: molecular docking, molecular dynamics simulations and MM-PBSA analyses.SARS-cov-2 RNA 依赖性 RNA 聚合酶蛋白的潜在抑制剂:分子对接、分子动力学模拟和 MM-PBSA 分析。
J Biomol Struct Dyn. 2022 Jan;40(1):361-374. doi: 10.1080/07391102.2020.1813628. Epub 2020 Sep 2.
3
Structure-based drug repurposing for targeting Nsp9 replicase and spike proteins of severe acute respiratory syndrome coronavirus 2.
Identifying SARS-CoV-2 Drugs Binding to the Spike Fatty Acid Binding Pocket Using In Silico Docking and Molecular Dynamics.
利用计算机对接和分子动力学鉴定与 SARS-CoV-2 刺突脂肪酸结合口袋结合的药物。
Int J Mol Sci. 2023 Feb 20;24(4):4192. doi: 10.3390/ijms24044192.
4
Chemical Attachment of 5-Nitrosalicylaldimine Motif to Silatrane Resulting in an Organic-Inorganic Structure with High Medicinal Significance.5-亚硝基水杨醛亚胺基序与硅氮烷的化学连接形成具有高药用价值的有机-无机结构。
Pharmaceutics. 2022 Dec 18;14(12):2838. doi: 10.3390/pharmaceutics14122838.
5
Computational studies indicated the effectiveness of human metabolites against SARS-Cov-2 main protease.计算研究表明,人体代谢物对 SARS-CoV-2 主蛋白酶具有有效性。
Mol Divers. 2023 Aug;27(4):1587-1602. doi: 10.1007/s11030-022-10513-6. Epub 2022 Aug 18.
6
A Review of In Silico Research, SARS-CoV-2, and Neurodegeneration: Focus on Papain-Like Protease.计算机模拟研究、SARS-CoV-2 与神经退行性变综述:聚焦木瓜蛋白酶样蛋白酶
Neurotox Res. 2022 Oct;40(5):1553-1569. doi: 10.1007/s12640-022-00542-2. Epub 2022 Aug 2.
7
Structure-based design and synthesis of a novel long-chain 4''-alkyl ether derivative of EGCG as potent EGFR inhibitor: and studies.基于结构的新型表没食子儿茶素没食子酸酯长链4''-烷基醚衍生物作为有效表皮生长因子受体抑制剂的设计与合成及研究
RSC Adv. 2022 Jun 16;12(28):17821-17836. doi: 10.1039/d2ra01919a. eCollection 2022 Jun 14.
8
Methodology-Centered Review of Molecular Modeling, Simulation, and Prediction of SARS-CoV-2.基于方法的 SARS-CoV-2 分子建模、模拟和预测综述。
Chem Rev. 2022 Jul 13;122(13):11287-11368. doi: 10.1021/acs.chemrev.1c00965. Epub 2022 May 20.
9
Identification of bio-active food compounds as potential SARS-CoV-2 PLpro inhibitors-modulators via negative image-based screening and computational simulations.通过基于负像的筛选和计算模拟鉴定具有生物活性的食物化合物作为潜在的 SARS-CoV-2 PLpro 抑制剂调节剂。
Comput Biol Med. 2022 Jun;145:105474. doi: 10.1016/j.compbiomed.2022.105474. Epub 2022 Apr 1.
10
Implication of in silico studies in the search for novel inhibitors against SARS-CoV-2.计算机模拟研究在寻找新型 SARS-CoV-2 抑制剂方面的意义。
Arch Pharm (Weinheim). 2022 May;355(5):e2100360. doi: 10.1002/ardp.202100360. Epub 2022 Mar 4.
基于结构的药物重定位靶向严重急性呼吸综合征冠状病毒 2 的 Nsp9 复制酶和刺突蛋白。
J Biomol Struct Dyn. 2022 Jan;40(1):249-262. doi: 10.1080/07391102.2020.1811773. Epub 2020 Aug 24.
4
In silico identification of widely used and well-tolerated drugs as potential SARS-CoV-2 3C-like protease and viral RNA-dependent RNA polymerase inhibitors for direct use in clinical trials.计算机筛选广泛使用且耐受性良好的药物作为潜在的 SARS-CoV-2 3CL 样蛋白酶和病毒 RNA 依赖性 RNA 聚合酶抑制剂,直接用于临床试验。
J Biomol Struct Dyn. 2021 Oct;39(17):6772-6791. doi: 10.1080/07391102.2020.1802346. Epub 2020 Aug 5.
5
Papain-like protease regulates SARS-CoV-2 viral spread and innate immunity.木瓜蛋白酶样蛋白酶调节新型冠状病毒2的病毒传播和固有免疫。
Nature. 2020 Nov;587(7835):657-662. doi: 10.1038/s41586-020-2601-5. Epub 2020 Jul 29.
6
Plant-derived natural polyphenols as potential antiviral drugs against SARS-CoV-2 RNA-dependent RNA polymerase (RdRp) inhibition: an analysis.植物源天然多酚类化合物作为抗 SARS-CoV-2 RNA 依赖性 RNA 聚合酶(RdRp)抑制剂的潜在抗病毒药物:分析。
J Biomol Struct Dyn. 2021 Oct;39(16):6249-6264. doi: 10.1080/07391102.2020.1796810. Epub 2020 Jul 28.
7
RNA-dependent RNA polymerase of SARS-CoV-2 as a therapeutic target.SARS-CoV-2 的 RNA 依赖性 RNA 聚合酶作为治疗靶点。
J Med Virol. 2021 Jan;93(1):300-310. doi: 10.1002/jmv.26264. Epub 2020 Jul 19.
8
Should We Try SARS-CoV-2 Helicase Inhibitors for COVID-19 Therapy?我们是否应该尝试使用 SARS-CoV-2 解旋酶抑制剂治疗 COVID-19?
Arch Med Res. 2020 Oct;51(7):733-735. doi: 10.1016/j.arcmed.2020.05.024. Epub 2020 May 31.
9
Virtual screening-driven drug discovery of SARS-CoV2 enzyme inhibitors targeting viral attachment, replication, post-translational modification and host immunity evasion infection mechanisms.基于虚拟筛选的 SARS-CoV2 酶抑制剂药物研发,针对病毒附着、复制、翻译后修饰和宿主免疫逃逸感染机制。
J Biomol Struct Dyn. 2021 Aug;39(12):4316-4333. doi: 10.1080/07391102.2020.1776639. Epub 2020 Jun 16.
10
State-of-the-art tools unveil potent drug targets amongst clinically approved drugs to inhibit helicase in SARS-CoV-2.先进工具揭示了临床批准药物中可抑制新冠病毒解旋酶的强效药物靶点。
Arch Med Sci. 2020 Apr 17;16(3):508-518. doi: 10.5114/aoms.2020.94567. eCollection 2020.