Johann-Friedrich-Blumenbach-Institute of Zoology and Anthropology-Developmental Biology, GZMB, Ernst-Caspari-Haus, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, Göttingen, Germany.
BMC Ecol. 2020 Nov 23;20(1):62. doi: 10.1186/s12898-020-00330-6.
The Drosophila melanogaster mutant white-mottled is a well-established model for position-effect variegation (PEV). Transposition of the euchromatic white gene into the vicinity of the pericentric heterochromatin caused variegated expression of white due to heterochromatin spreading. The establishment of the euchromatin-heterochromatin boundary and spreading of silencing is regulated by mutually exclusive histone modifications, i.e. the methylations of histone H3 at lysine 9 and lysine 4. Demethylation of H3K4, catalysed by lysine-specific demethylase LSD1, is required for subsequent methylation of H3K9 to establish heterochromatin. LSD1 is therefore essential for heterochromatin formation and spreading. We asked whether drug-mediated inhibition of LSD affects the expression of white and if this induced change can be transmitted to those generations that have never been exposed to the triggering signal, i.e. transgenerational epigenetic inheritance.
We used the lysine-specific demethylase 1 (LSD1)-inhibitor Tranylcypromine to investigate its effect on eye colour expression in consecutive generations by feeding the parental and F1 generations of the Drosophila melanogaster mutant white-mottled. Quantitative Western blotting revealed that Tranylcypromine inhibits H3K4-demethylation both in vitro in S2 cells as well as in embryos when used as feeding additive. Eye colour expression in male flies was determined by optical measurement of pigment extracts and qRT-PCR of white gene expression. Flies raised in the presence of Tranylcypromine and its solvent DMSO showed increased eye pigment expression. Beyond that, eye pigment expression was also affected in consecutive generations including F3, which is the first generation without contact with the inhibitor.
Our results show that feeding of Tranylcypromine and DMSO caused desilencing of white in treated flies of generation F1. Consecutive generations, raised on standard food without further supplements, are also affected by the drug-induced alteration of histone modifications. Although eye pigment expression eventually returned to the basal state, the observed long-lasting effect points to a memory capacity of previous epigenomes. Furthermore, our results indicate that food compounds potentially affect chromatin modification and hence gene expression and that the alteration is putatively inherited not only parentally but transgenerationally.
果蝇突变体 white-mottled 是位置效应异染色质(PEV)的成熟模型。常染色质 white 基因转座到近着丝粒异染色质附近,导致 white 由于异染色质扩散而呈现斑驳表达。常染色质-异染色质边界的建立和沉默的扩散受到相互排斥的组蛋白修饰的调节,即组蛋白 H3 赖氨酸 9 和赖氨酸 4 的甲基化。赖氨酸特异性去甲基酶 LSD1 催化的 H3K4 去甲基化对于随后的 H3K9 甲基化以建立异染色质是必需的。因此,LSD1 对于异染色质的形成和扩散是必不可少的。我们想知道 LSD 的药物介导抑制是否会影响 white 的表达,以及这种诱导的变化是否可以传递给那些从未接触过触发信号的后代,即跨代表观遗传遗传。
我们使用赖氨酸特异性去甲基酶 1(LSD1)抑制剂曲安奈德来研究它对果蝇突变体 white-mottled 的连续几代的眼睛颜色表达的影响。定量 Western blot 显示,曲安奈德在 S2 细胞中以及作为饲料添加剂时在胚胎中抑制 H3K4 去甲基化。雄性苍蝇的眼睛颜色表达通过对色素提取物的光学测量和 white 基因表达的 qRT-PCR 来确定。在曲安奈德及其溶剂 DMSO 的存在下饲养的苍蝇显示出增加的眼睛色素表达。除此之外,包括 F3 在内的连续几代的眼睛色素表达也受到影响,F3 是第一代没有接触抑制剂的苍蝇。
我们的结果表明,在第一代 F1 苍蝇中喂食曲安奈德和 DMSO 导致 white 的去沉默。在没有进一步补充的标准食物上饲养的连续几代也受到药物诱导的组蛋白修饰改变的影响。尽管眼睛色素表达最终恢复到基础状态,但观察到的持久效应表明以前的表观基因组具有记忆能力。此外,我们的结果表明,食物化合物可能会影响染色质修饰,从而影响基因表达,并且这种改变不仅是亲本遗传的,而且是跨代遗传的。