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MSX1作为子宫内膜癌孕激素抵抗关键候选基因的鉴定与验证

Identification and Validation of MSX1 as a Key Candidate for Progestin Resistance in Endometrial Cancer.

作者信息

Yang Linlin, Cui Yunxia, Huang Ting, Sun Xiao, Wang Yudong

机构信息

Department of Gynecologic Oncology, The International Peace Maternity and Child Health Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, People's Republic of China.

Shanghai Municipal Key Clinical Specialty, Shanghai, People's Republic of China.

出版信息

Onco Targets Ther. 2020 Nov 13;13:11669-11688. doi: 10.2147/OTT.S271494. eCollection 2020.

Abstract

PURPOSE

Progestin resistance is a critical obstacle for endometrial conservative therapy. Therefore, studies to acquire a more comprehensive understanding of the mechanisms are urgent. However, the pivotal molecules are still unexplored.

MATERIALS AND METHODS

We downloaded GSE121367 from the GEO database. The "limma" R language package was applied to identify differentially expressed genes (DEGs). We conducted Gene Set Enrichment Analysis (GSEA) and Gene Set Variation Analysis (GSVA). Protein-protein interaction was constructed by STRING and visualized in Cytoscape. The tumor immune microenvironment was explored by the TISIDB database. Methylation validation and overall survival analysis were conducted by the TCGA database. In addition, the upstream modulators of hub genes were predicted by miRTarBase and Network Analyst databases. The expression levels of candidate genes were validated by quantitative real-time PCR (qRT-PCR), Western blot, and immunohistochemical assay (IHC). Cell growth, clone formation, migration, invasion, and wound healing assays were studied to explore the role of in progestin resistance in vitro.

RESULTS

A total of 3,282 DEGs were identified and they were mostly enriched in the cell adhesion pathway. We screened out ten hub genes whose genomic alteration rates were low based on the current endometrial carcinoma sample sets. Has-miR-335-5p, has-miR-124-3p, , and were the most prominent upstream regulators. The methylation status of , and was decreased, corresponding to their high protein expression, which also predicted better overall survival. The homeobox protein of showed significant tissue specificity and better prognostic value and its knockdown inhibited epithelial-mesenchymal transitions (EMT) and enhanced progesterone efficacy.

CONCLUSION

Our study identified that the gene of promised to be the specific indicator and therapeutic target for progestin resistance. This would shed new light on the underlying biological mechanism to overcome progestin resistance of endometrial cancer.

摘要

目的

孕激素抵抗是子宫内膜癌保守治疗的关键障碍。因此,迫切需要开展研究以更全面地了解其机制。然而,关键分子仍未被探索。

材料与方法

我们从基因表达综合数据库(GEO数据库)下载了GSE121367。应用“limma”R语言包来鉴定差异表达基因(DEG)。我们进行了基因集富集分析(GSEA)和基因集变异分析(GSVA)。通过STRING构建蛋白质-蛋白质相互作用,并在Cytoscape中进行可视化。通过TISIDB数据库探索肿瘤免疫微环境。利用TCGA数据库进行甲基化验证和总生存分析。此外,通过miRTarBase和Network Analyst数据库预测枢纽基因的上游调节因子。通过定量实时PCR(qRT-PCR)、蛋白质免疫印迹法和免疫组织化学检测(IHC)验证候选基因的表达水平。研究细胞生长、克隆形成、迁移、侵袭和伤口愈合试验,以探讨其在体外孕激素抵抗中的作用。

结果

共鉴定出3282个差异表达基因,它们大多富集于细胞黏附途径。基于当前的子宫内膜癌样本集,我们筛选出了10个基因组改变率较低的枢纽基因。Has-miR-335-5p、has-miR-124-3p等是最显著的上游调节因子。某些基因的甲基化状态降低,与其高蛋白表达相对应,这也预示着更好的总生存。某基因的同源盒蛋白表现出显著的组织特异性和更好的预后价值,其敲低可抑制上皮-间质转化(EMT)并增强孕激素疗效。

结论

我们的研究表明,某基因有望成为孕激素抵抗的特异性指标和治疗靶点。这将为克服子宫内膜癌孕激素抵抗的潜在生物学机制提供新的线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/162f/7679365/3b74a9fe28e3/OTT-13-11669-g0001.jpg

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