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作为可逆应激颗粒形成模型的具有折叠 RNA 结合结构域的胶束 TIA1。

Micellar TIA1 with folded RNA binding domains as a model for reversible stress granule formation.

机构信息

Department of Chemistry, Columbia University, New York, NY 10027.

Department of Neuroscience, College of Physicians and Surgeons, Columbia University, New York, NY 10032.

出版信息

Proc Natl Acad Sci U S A. 2020 Dec 15;117(50):31832-31837. doi: 10.1073/pnas.2007423117. Epub 2020 Nov 30.

Abstract

TIA1, a protein critical for eukaryotic stress response and stress granule formation, is structurally characterized in full-length form. TIA1 contains three RNA recognition motifs (RRMs) and a C-terminal low-complexity domain, sometimes referred to as a "prion-related domain" or associated with amyloid formation. Under mild conditions, full-length (fl) mouse TIA1 spontaneously oligomerizes to form a metastable colloid-like suspension. RRM2 and RRM3, known to be critical for function, are folded similarly in excised domains and this oligomeric form of apo fl TIA1, based on NMR chemical shifts. By contrast, the termini were not detected by NMR and are unlikely to be amyloid-like. We were able to assign the NMR shifts with the aid of previously assigned solution-state shifts for the RRM2,3 isolated domains and homology modeling. We present a micellar model of fl TIA1 wherein RRM2 and RRM3 are colocalized, ordered, hydrated, and available for nucleotide binding. At the same time, the termini are disordered and phase separated, reminiscent of stress granule substructure or nanoscale liquid droplets.

摘要

TIA1 是一种对真核生物应激反应和应激颗粒形成至关重要的蛋白质,其全长形式具有结构特征。TIA1 包含三个 RNA 识别基序(RRMs)和一个 C 端低复杂度结构域,有时被称为“类朊病毒结构域”或与淀粉样形成相关。在温和条件下,全长(fl)小鼠 TIA1 自发寡聚形成亚稳态胶体样悬浮液。已知对功能至关重要的 RRM2 和 RRM3 在切除的结构域中折叠相似,并且这种apo fl TIA1 的寡聚形式基于 NMR 化学位移。相比之下,NMR 未检测到末端,不太可能是类淀粉样的。我们能够借助先前为 RRM2、3 分离结构域和同源建模分配的溶液状态位移来分配 NMR 位移。我们提出了 fl TIA1 的胶束模型,其中 RRM2 和 RRM3 共定位、有序、水合并可用于核苷酸结合。同时,末端无序且相分离,使人联想到应激颗粒亚结构或纳米级液滴。

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