• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

结构化蛋白质结构域成为焦点:生物分子凝聚体形成和功能的调节剂。

Structured protein domains enter the spotlight: modulators of biomolecular condensate form and function.

作者信息

Hess Nathaniel, Joseph Jerelle A

机构信息

Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08544, USA.

Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08544, USA; Omenn-Darling Bioengineering Institute, Princeton University, Princeton, NJ 08544, USA.

出版信息

Trends Biochem Sci. 2025 Mar;50(3):206-223. doi: 10.1016/j.tibs.2024.12.008. Epub 2025 Jan 17.

DOI:10.1016/j.tibs.2024.12.008
PMID:39827079
Abstract

Biomolecular condensates are membraneless organelles that concentrate proteins and nucleic acids. One of the primary components of condensates is multidomain proteins, whose domains can be broadly classified as structured and disordered. While structured protein domains are ubiquitous within biomolecular condensates, the physical ramifications of their unique properties have been relatively underexplored. Therefore, this review synthesizes current literature pertaining to structured protein domains within the context of condensates. We examine how the propensity of structured domains for high interaction specificity and low conformational heterogeneity contributes to the formation, material properties, and functions of biomolecular condensates. Finally, we propose unanswered questions on the behavior of structured protein domains within condensates, the answers of which will contribute to a more complete understanding of condensate biophysics.

摘要

生物分子凝聚体是浓缩蛋白质和核酸的无膜细胞器。凝聚体的主要成分之一是多结构域蛋白,其结构域大致可分为结构化和无序化两类。虽然结构化蛋白结构域在生物分子凝聚体中普遍存在,但其独特性质的物理影响却相对未被充分探索。因此,本综述综合了有关凝聚体中结构化蛋白结构域的现有文献。我们研究了结构化结构域对高相互作用特异性和低构象异质性的倾向如何促进生物分子凝聚体的形成、材料特性和功能。最后,我们提出了关于凝聚体中结构化蛋白结构域行为的未解决问题,这些问题的答案将有助于更全面地理解凝聚体生物物理学。

相似文献

1
Structured protein domains enter the spotlight: modulators of biomolecular condensate form and function.结构化蛋白质结构域成为焦点:生物分子凝聚体形成和功能的调节剂。
Trends Biochem Sci. 2025 Mar;50(3):206-223. doi: 10.1016/j.tibs.2024.12.008. Epub 2025 Jan 17.
2
Splicing regulation through biomolecular condensates and membraneless organelles.通过生物分子凝聚物和无膜细胞器进行剪接调控。
Nat Rev Mol Cell Biol. 2024 Sep;25(9):683-700. doi: 10.1038/s41580-024-00739-7. Epub 2024 May 21.
3
Conformational Freedom and Topological Confinement of Proteins in Biomolecular Condensates.生物分子凝聚物中蛋白质的构象自由度和拓扑约束
J Mol Biol. 2022 Jan 15;434(1):167348. doi: 10.1016/j.jmb.2021.167348. Epub 2021 Nov 9.
4
Genetically-Encoded Phase Separation Sensors Enable High-Fidelity Live-Cell Probing of Biomolecular Condensates.基因编码的相分离传感器能够对生物分子凝聚物进行高保真活细胞探测。
ACS Sens. 2025 Mar 28;10(3):1857-1869. doi: 10.1021/acssensors.4c02851. Epub 2025 Feb 23.
5
Sequence determinants of in cell condensate morphology, dynamics, and oligomerization as measured by number and brightness analysis.通过数量和亮度分析测量细胞凝聚物形态、动力学和寡聚化的序列决定因素。
Cell Commun Signal. 2021 Jun 5;19(1):65. doi: 10.1186/s12964-021-00744-9.
6
Sequence variations of phase-separating proteins and resources for studying biomolecular condensates.相分离蛋白的序列变异及生物分子凝聚物研究资源
Acta Biochim Biophys Sin (Shanghai). 2023 Jul 18;55(7):1119-1132. doi: 10.3724/abbs.2023131.
7
Higher-order organization of biomolecular condensates.生物分子凝聚物的高级组织。
Open Biol. 2021 Jun;11(6):210137. doi: 10.1098/rsob.210137. Epub 2021 Jun 16.
8
Biomolecular Condensates in Contact with Membranes.生物分子凝聚物与膜的接触。
Annu Rev Biophys. 2024 Jul;53(1):319-341. doi: 10.1146/annurev-biophys-030722-121518. Epub 2024 Jun 28.
9
Fundamental Aspects of Phase-Separated Biomolecular Condensates.相分离生物分子凝聚体的基本方面。
Chem Rev. 2024 Jul 10;124(13):8550-8595. doi: 10.1021/acs.chemrev.4c00138. Epub 2024 Jun 17.
10
Amphiphilic proteins coassemble into multiphasic condensates and act as biomolecular surfactants.两亲性蛋白共同组装成多相凝聚物,并充当生物分子表面活性剂。
Proc Natl Acad Sci U S A. 2021 Dec 21;118(51). doi: 10.1073/pnas.2109967118.

引用本文的文献

1
Biomolecular phase separation in tumorigenesis: from aberrant condensates to therapeutic vulnerabilities.肿瘤发生中的生物分子相分离:从异常凝聚物到治疗靶点
Mol Cancer. 2025 Aug 23;24(1):220. doi: 10.1186/s12943-025-02428-1.
2
A Charge-Driven Strategy for Covalent Modification and Modulation of Biomolecular Condensates.一种用于生物分子凝聚物共价修饰和调控的电荷驱动策略。
J Am Chem Soc. 2025 Aug 13;147(32):28558-28563. doi: 10.1021/jacs.5c06625. Epub 2025 Aug 2.
3
Prediction of Small-Molecule Partitioning into Biomolecular Condensates from Simulation.

本文引用的文献

1
Intra-condensate demixing of TDP-43 inside stress granules generates pathological aggregates.应激颗粒内TDP-43的凝聚物内部分相产生病理性聚集体。
Cell. 2025 May 15. doi: 10.1016/j.cell.2025.04.039.
2
Single-fluorogen imaging reveals distinct environmental and structural features of biomolecular condensates.单荧光成像揭示了生物分子凝聚物独特的环境和结构特征。
Nat Phys. 2025;21(5):778-786. doi: 10.1038/s41567-025-02827-7. Epub 2025 Mar 14.
3
PEG-mCherry interactions beyond classical macromolecular crowding.聚乙二醇(PEG)与单体红色荧光蛋白(mCherry)的相互作用超越了经典的大分子拥挤效应。
通过模拟预测小分子在生物分子凝聚物中的分配
JACS Au. 2025 Jul 3;5(7):3125-3139. doi: 10.1021/jacsau.5c00291. eCollection 2025 Jul 28.
4
Phase separation of PGL-3 driven by structured domains that oligomerize and interact with terminal RGG motifs.由寡聚化并与末端RGG基序相互作用的结构化结构域驱动的PGL-3相分离。
bioRxiv. 2025 Jun 24:2025.06.23.660947. doi: 10.1101/2025.06.23.660947.
5
Interaction networks within biomolecular condensates feature topological cliques near the interface.生物分子凝聚物中的相互作用网络在界面附近具有拓扑团。
bioRxiv. 2025 Mar 27:2025.03.25.645354. doi: 10.1101/2025.03.25.645354.
6
Prediction of small-molecule partitioning into biomolecular condensates from simulation.通过模拟预测小分子在生物分子凝聚物中的分配。
bioRxiv. 2025 Mar 6:2025.03.04.641530. doi: 10.1101/2025.03.04.641530.
Protein Sci. 2025 Mar;34(3):e5235. doi: 10.1002/pro.5235.
4
SOP-MULTI: A Self-Organized Polymer-Based Coarse-Grained Model for Multidomain and Intrinsically Disordered Proteins with Conformation Ensemble Consistent with Experimental Scattering Data.SOP-MULTI:一种基于自组织聚合物的粗粒度模型,用于具有构象集合与实验散射数据一致的多结构域和固有无序蛋白质。
J Chem Theory Comput. 2024 Nov 26;20(22):10179-10198. doi: 10.1021/acs.jctc.4c00579. Epub 2024 Nov 5.
5
A coarse-grained model for disordered and multi-domain proteins.一种针对无序和多结构域蛋白质的粗粒度模型。
Protein Sci. 2024 Nov;33(11):e5172. doi: 10.1002/pro.5172.
6
Atomic resolution map of the solvent interactions driving SOD1 unfolding in CAPRIN1 condensates.原子分辨率图揭示了溶剂相互作用驱动 CAPRIN1 凝聚物中 SOD1 展开。
Proc Natl Acad Sci U S A. 2024 Aug 27;121(35):e2408554121. doi: 10.1073/pnas.2408554121. Epub 2024 Aug 22.
7
CLASP-mediated competitive binding in protein condensates directs microtubule growth.CLASP 介导的竞争结合在蛋白质凝聚物中指导微管生长。
Nat Commun. 2024 Aug 2;15(1):6509. doi: 10.1038/s41467-024-50863-3.
8
An autoinhibitory switch of the LSD1 disordered region controls enhancer silencing.LSD1 无规则区域的自动抑制开关控制增强子沉默。
Mol Cell. 2024 Jun 20;84(12):2238-2254.e11. doi: 10.1016/j.molcel.2024.05.017. Epub 2024 Jun 12.
9
MYC phase separation selectively modulates the transcriptome.MYC 相分离选择性地调节转录组。
Nat Struct Mol Biol. 2024 Oct;31(10):1567-1579. doi: 10.1038/s41594-024-01322-6. Epub 2024 May 29.
10
Ionic Effect on the Microenvironment of Biomolecular Condensates.离子对生物分子凝聚物微环境的影响。
J Am Chem Soc. 2024 May 22;146(20):14307-14317. doi: 10.1021/jacs.4c04036. Epub 2024 May 9.