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生物纳米孔单分子蛋白质测序方法。

Biological Nanopore Approach for Single-Molecule Protein Sequencing.

机构信息

State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Avenue, Nanjing, 210023, P. R. China.

Chemistry and Biomedicine Innovation Center, Nanjing University, 163 Xianlin Avenue, Nanjing, 210023, P. R. China.

出版信息

Angew Chem Int Ed Engl. 2021 Jun 25;60(27):14738-14749. doi: 10.1002/anie.202013462. Epub 2021 Feb 26.

Abstract

Proteins are responsible for the occurrence and treatment of many diseases, and therefore protein sequencing will revolutionize proteomics and clinical diagnostics. Biological nanopore approach has proved successful for single-molecule DNA sequencing, which resolves the identities of 4 natural deoxyribonucleotides based on the current blockages and duration times of their translocations across the nanopore confinement. However, open challenges still remain for biological nanopores to sequentially identify each amino acid (AA) of single proteins due to the inherent complexity of 20 proteinogenic AAs in charges, volumes, hydrophobicity and structures. Herein, we focus on recent exciting advances in biological nanopores for single-molecule protein sequencing (SMPS) from native protein unfolding, control of peptide translocation, AA identification to applications in disease detection.

摘要

蛋白质是许多疾病发生和治疗的关键,因此蛋白质测序将彻底改变蛋白质组学和临床诊断。生物纳米孔方法已被证明可成功用于单分子 DNA 测序,该方法基于其穿过纳米孔限制时的阻塞和持续时间来解析 4 种天然脱氧核苷酸的身份。然而,由于 20 种蛋白质氨基酸在电荷、体积、疏水性和结构方面的固有复杂性,生物纳米孔在顺序识别单个蛋白质的每个氨基酸(AA)方面仍然存在开放性挑战。在此,我们重点介绍生物纳米孔在从天然蛋白质展开、肽转移控制、AA 鉴定到疾病检测应用等方面用于单分子蛋白质测序(SMPS)的最新令人兴奋的进展。

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