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全面转录组分析鉴定唾液酸化转移酶基因 为乳腺癌的生存相关基因。

Comprehensive Transcriptomic Analysis Identifies as a Survival-Related Sialyltransferase Gene in Breast Cancer.

机构信息

Department of Surgery, Kaohsiung Medical University Hospital, Kaohsiung 80756, Taiwan.

Division of Breast Surgery, Department of Surgery, Kaohsiung Medical University Hospital, Kaohsiung 80756, Taiwan.

出版信息

Genes (Basel). 2020 Nov 28;11(12):1436. doi: 10.3390/genes11121436.

Abstract

Hypersialylation caused by the overexpression of sialyltransferases (STs) is a common feature in cancer that is associated with several characteristics of tumorigenesis. Thus, identifying cancer-associated STs is critical for cancer therapy. However, ST screening has been frequently conducted in cell line models. In this study, we conducted a comprehensive analysis of STs in the clinical database and identified the STs related with the survival of breast cancer patients. RNA sequencing (RNA-Seq) data of 496 patients were obtained from The Cancer Genome Atlas Breast Invasive Carcinoma (TCGA-BRCA). Of the eight mapped STs, , and met the acceptable area under the curve (AUC) criteria for overall survival (OS). Using Kaplan-Meier methods, we determined that high expression of was associated with poor 10-year OS in all patients, triple-negative breast cancer (TNBC), and non-TNBC patients, and poor disease-free survival (DFS) rates particularly in TNBC. also had superior AUC values in terms of OS/DFS. High levels showed a higher risk for poor OS in different groups of patients and a higher risk for poor DFS particularly in TNBC. In summary, we conducted a comprehensive analysis of STs from the clinical database and identified as a crucial survival-related ST, which might be a potential therapeutic target for breast cancer and TNBC patients.

摘要

高唾液酸化是由于唾液酸转移酶(sialyltransferases,STs)的过度表达引起的,是癌症的一个常见特征,与肿瘤发生的几个特征有关。因此,鉴定与癌症相关的 STs 对于癌症治疗至关重要。然而,ST 筛选经常在细胞系模型中进行。在本研究中,我们对临床数据库中的 STs 进行了全面分析,并鉴定了与乳腺癌患者生存相关的 STs。从癌症基因组图谱乳腺浸润性癌(TCGA-BRCA)中获得了 496 名患者的 RNA 测序(RNA-Seq)数据。在 8 个映射的 STs 中, ,和 满足了总体生存(OS)的可接受的曲线下面积(AUC)标准。使用 Kaplan-Meier 方法,我们确定高表达 与所有患者、三阴性乳腺癌(TNBC)和非 TNBC 患者的 10 年 OS 不良以及 TNBC 患者的无病生存(DFS)率差有关。 在 OS/DFS 方面也具有较高的 AUC 值。高 水平在不同患者组中显示出 OS 不良的高风险,尤其是在 TNBC 中 DFS 不良的风险更高。总之,我们对临床数据库中的 STs 进行了全面分析,鉴定 为关键的生存相关 ST,它可能是乳腺癌和 TNBC 患者的潜在治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cb3a/7760851/9f5b23fc51fa/genes-11-01436-g001.jpg

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