Foundation for Innovative New Diagnostics, Geneva, Switzerland
Department of Molecular Medicine and Haematology, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
J Clin Microbiol. 2021 Feb 18;59(3). doi: 10.1128/JCM.02168-20.
Failure to rapidly identify drug-resistant tuberculosis (TB) increases the risk of patient mismanagement, the amplification of drug resistance, and ongoing transmission. We generated comparative analytical data for four automated assays for the detection of TB and multidrug-resistant TB (MDR-TB): Abbott RealTie MTB and MTB RIF/INH (Abbott), Hain Lifescience FluoroType MTBDR (Hain), BD Max MDR-TB (BD), and Roche cobas MTB and MTB-RIF/INH (Roche). We included Xpert MTB/RIF (Xpert) and GenoType MTBDR as comparators for TB and drug resistance detection, respectively. We assessed analytical sensitivity for the detection of the complex using inactivated strains ( H37Rv and ) spiked into TB-negative sputa and computed the 95% limits of detection (LOD). We assessed the accuracy of rifampicin and isoniazid resistance detection using well-characterized strains with high-confidence mutations accounting for >85% of first-line resistance mechanisms globally. For H37Rv and , we measured LOD values of 3,781 and 2,926 (Xpert), 322 and 2,182 (Abbott), 826 and 4,301 (BD), 10,398 and 23,139 (Hain), and 2,416 and 2,136 (Roche) genomes/ml, respectively. Assays targeting multicopy genes or targets (Abbott, BD, and Roche) showed increased analytical sensitivity compared to Xpert. Quantification of the panel by quantitative real-time PCR prevents the determination of absolute values, and results reported here can be interpreted for comparison purposes only. All assays showed accuracy comparable to that of Genotype MTBDR for the detection of rifampicin and isoniazid resistance. The data from this analytical study suggest that the assays may have clinical performances similar to those of WHO-recommended molecular TB and MDR-TB assays.
未能快速识别耐药结核病 (TB) 会增加患者管理不当、耐药性扩大和持续传播的风险。我们为四种用于检测结核病和耐多药结核病 (MDR-TB) 的自动化检测方法生成了比较分析数据:Abbott RealTie MTB 和 MTB RIF/INH(雅培)、Hain Lifescience FluoroType MTBDR(Hain)、BD Max MDR-TB(BD)和 Roche cobas MTB 和 MTB-RIF/INH(罗氏)。我们分别将 Xpert MTB/RIF(Xpert)和 GenoType MTBDR 用作检测结核病和耐药性的比较器。我们评估了使用灭活菌株(H37Rv 和 )对复杂样本进行检测的分析灵敏度,并计算了 95%检测限(LOD)。我们使用具有高置信度突变的具有代表性的 菌株评估了利福平耐药和异烟肼耐药检测的准确性,这些突变占全球一线耐药机制的 >85%。对于 H37Rv 和 ,我们测量的 LOD 值分别为 3,781 和 2,926(Xpert)、322 和 2,182(Abbott)、826 和 4,301(BD)、10,398 和 23,139(Hain)和 2,416 和 2,136(罗氏)基因组/ml。针对多拷贝基因或靶标的检测方法(雅培、BD 和罗氏)与 Xpert 相比显示出更高的分析灵敏度。通过实时定量 PCR 对该面板进行定量,无法确定绝对值,此处报告的结果仅可用于比较目的。所有检测方法在检测利福平和异烟肼耐药性方面的准确性均与 Genotype MTBDR 相当。这项分析研究的数据表明,这些检测方法的临床性能可能与世界卫生组织推荐的分子结核病和耐多药结核病检测方法相似。