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成年尤卡坦小型猪的群体平均立体定向T2加权磁共振成像脑模板

Population Averaged Stereotaxic T2w MRI Brain Template for the Adult Yucatan Micropig.

作者信息

Chang Stephano J, Santamaria Andrea J, Sanchez Francisco J, Villamil Luz M, Pinheiro Saraiva Pedro, Rodriguez Jose, Nunez-Gomez Yohjans, Opris Ioan, Solano Juan P, Guest James D, Noga Brian R

机构信息

Neuroscience Graduate Program, University of Miami Miller School of Medicine, Miami, FL, United States.

The Miami Project to Cure Paralysis, University of Miami Miller School of Medicine, Miami, FL, United States.

出版信息

Front Neuroanat. 2020 Nov 13;14:599701. doi: 10.3389/fnana.2020.599701. eCollection 2020.

Abstract

Population averaged brain templates are an essential tool for imaging-based neuroscience research, providing investigators with information about the expected size and morphology of brain structures and the spatial relationships between them, within a demographic cross-section. This allows for a standardized comparison of neuroimaging data between subjects and provides neuroimaging software with a probabilistic framework upon which further processing and analysis can be based. Many different templates have been created to represent specific study populations and made publicly available for human and animal research. An increasingly studied animal model in the neurosciences that still lacks appropriate brain templates is the adult Yucatan micropig. In particular, T2-weighted templates are absent in this species as a whole. To address this need and provide a tool for neuroscientists wishing to pursue neuroimaging research in the adult micropig, we present the construction of population averaged ( = 16) T2-weighted MRI brain template for the adult Yucatan micropig. Additionally, we present initial analysis of T1-weighted ( = 3), and diffusion-weighted ( = 3) images through multimodal registration of these contrasts to our T2 template. The strategies used here may also be generalized to create similar templates for other study populations or species in need of template construction.

摘要

群体平均脑模板是基于成像的神经科学研究的重要工具,可在人口统计学横截面内为研究人员提供有关脑结构预期大小和形态以及它们之间空间关系的信息。这使得能够对受试者之间的神经影像数据进行标准化比较,并为神经影像软件提供一个概率框架,在此基础上可以进行进一步的处理和分析。已经创建了许多不同的模板来代表特定的研究群体,并已公开提供给人类和动物研究使用。在神经科学领域中,一种越来越受到研究但仍缺乏合适脑模板的动物模型是成年尤卡坦小型猪。特别是,整个该物种都没有T2加权模板。为了满足这一需求,并为希望在成年小型猪中进行神经影像研究的神经科学家提供一种工具,我们展示了针对成年尤卡坦小型猪构建的群体平均(n = 16)T2加权MRI脑模板。此外,我们通过将这些对比图像与我们的T2模板进行多模态配准,展示了对T1加权(n = 3)和扩散加权(n = 3)图像的初步分析。这里使用的策略也可以推广,为其他需要模板构建的研究群体或物种创建类似的模板。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f39c/7691581/8ca98e9bb1c7/fnana-14-599701-g0001.jpg

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本文引用的文献

1
Ethics of primate use.
Adv Sci Res. 2010 Nov;5(1):11-22. doi: 10.5194/asr-5-11-2010. Epub 2010 Nov 12.
2
MRI brain templates of the male Yucatan minipig.
Neuroimage. 2021 Jul 15;235:118015. doi: 10.1016/j.neuroimage.2021.118015. Epub 2021 Mar 30.
4
Anatomical and diffusion MRI brain atlases of the fetal rhesus macaque brain at 85, 110 and 135 days gestation.
Neuroimage. 2020 Feb 1;206:116310. doi: 10.1016/j.neuroimage.2019.116310. Epub 2019 Oct 24.
5
Equine Stereotaxtic Population Average Brain Atlas With Neuroanatomic Correlation.
Front Neuroanat. 2019 Oct 3;13:89. doi: 10.3389/fnana.2019.00089. eCollection 2019.
6
MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation.
Neuroimage. 2019 Nov 15;202:116137. doi: 10.1016/j.neuroimage.2019.116137. Epub 2019 Aug 29.
7
Complex diffusion-weighted image estimation via matrix recovery under general noise models.
Neuroimage. 2019 Oct 15;200:391-404. doi: 10.1016/j.neuroimage.2019.06.039. Epub 2019 Jun 18.
8
A stereotaxic breed-averaged, symmetric T2w canine brain atlas including detailed morphological and volumetrical data sets.
Neuroimage. 2019 Feb 15;187:93-103. doi: 10.1016/j.neuroimage.2018.01.066. Epub 2018 Jan 31.
9
Automatic delineation of brain regions on MRI and PET images from the pig.
J Neurosci Methods. 2018 Jan 15;294:51-58. doi: 10.1016/j.jneumeth.2017.11.008. Epub 2017 Nov 13.

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