The Second Clinic Medical College, Guangzhou University of Chinese Medicine, Guangzhou 510006, PR China.
Guangzhou KingMed Center for Clinical Laboratory, Guangzhou 510330, PR China.
Int J Syst Evol Microbiol. 2021 Jan;71(1). doi: 10.1099/ijsem.0.004592. Epub 2020 Dec 7.
Four strains (km711, km714, km542 and km524), representing a novel species, were isolated from aquatic environments in northern PR China. Cells were Gram-stain-negative, rod-shaped, microaerobic, motile and growth depended on l-cysteine. They grew at 25‒42 °C (optimum, 35‒37 °C) and could tolerate up to 1.5 % (w/v) NaCl (optimum, 0.5 %). The major fatty acids (>5 %) of the type strain km711 were C anteiso, C anteiso, iso-C and C 7 and/or iso-C 2OH. The pairwise comparison values were <96.1 % for 16S rRNA gene sequences, 23.3‒28.7 % interspecies variation for gene sequences, <93.6 % average nucleotide identity and <72.8 % average amino acid identity between these four strains and related type strains within the genus . The phylogenetic tree based on the four concatenated genes (16S rRNA, , and ) and protein-concatamer tree based on concatenation of 21 protein markers both revealed that these four strains formed a separate phylogenetic branch cluster within the genus . The results of phenotypic and genotypic features suggest that these four strains represent a novel species of the genus , for which the name sp. nov. is proposed (type strain km711=KCTC 15655=NBRC 113219).
从中国北方的水生环境中分离出四株(km711、km714、km542 和 km524)代表了一个新的种。细胞革兰氏阴性,杆状,微需氧,运动,生长依赖于 L-半胱氨酸。它们在 25-42°C(最佳,35-37°C)下生长,可以耐受高达 1.5%(w/v)NaCl(最佳,0.5%)。模式株 km711 的主要脂肪酸(>5%)为 C anteiso、C anteiso、iso-C 和 C 7 和/或 iso-C 2OH。16S rRNA 基因序列的成对比较值<96.1%,基因序列的种间变异值为 23.3-28.7%,与属内相关模式株的平均核苷酸同一性<93.6%,平均氨基酸同一性<72.8%。基于四个串联基因(16S rRNA、、和)的系统发育树和基于 21 个蛋白标记物串联的蛋白串联树都表明,这四株菌在属内形成了一个单独的系统发育分支群。表型和基因型特征的结果表明,这四株菌代表了属内的一个新种,建议将其命名为 sp. nov.(模式株 km711=KCTC 15655=NBRC 113219)。