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转座子插入促进同源物上调,从而促进生菜的多叶头发育。

Upregulation of a homolog by transposon insertion promotes leafy head development in lettuce.

机构信息

Key Laboratory of Horticultural Plant Biology, Ministry of Education, Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), Ministry of Agriculture (MOA), College of Horticulture and Forestry Sciences, Huazhong Agricultural University, 430070 Wuhan, People's Republic of China.

Genome Center and Department of Plant Sciences, University of California, Davis, CA 95616.

出版信息

Proc Natl Acad Sci U S A. 2020 Dec 29;117(52):33668-33678. doi: 10.1073/pnas.2019698117. Epub 2020 Dec 7.

Abstract

Leafy head is a unique type of plant architecture found in some vegetable crops, with leaves bending inward to form a compact head. The genetic and molecular mechanisms underlying leafy head in vegetables remain poorly understood. We genetically fine-mapped and cloned a major quantitative trait locus controlling heading in lettuce. The candidate gene () is a homolog of () from Complementation and CRISPR/Cas9 knockout experiments confirmed the role of in heading. In heading lettuce, there is a CACTA-like transposon inserted into the first exon of (▽). The transposon sequences act as a promoter rather than an enhancer and drive high expression of ▽. The enhanced expression of ▽ is necessary but not sufficient for heading in lettuce. Data from ChIP-sequencing, electrophoretic mobility shift assays, and dual luciferase assays indicate that the LsKN1▽ protein binds the promoter of and down-regulates its expression to alter leaf dorsoventrality. This study provides insight into plant leaf development and will be useful for studies on heading in other vegetable crops.

摘要

结球叶型是某些蔬菜作物特有的一种植物结构,其叶片向内弯曲形成紧实的叶球。然而,蔬菜结球叶型的遗传和分子机制仍不清楚。本研究通过图位克隆的方法,克隆了生菜结球的主效数量性状基因座。候选基因为 ()的同源基因,该基因与拟南芥 ()的同源基因具有较高的序列相似性。互补实验和 CRISPR/Cas9 敲除实验均证明 ()在生菜结球过程中起作用。在结球生菜中,一个 CACTA 类转座子插入到 ()的第一个外显子中(▽)。该转座子序列作为启动子而非增强子驱动 (▽)的高表达。▽的高表达对于生菜结球是必要的,但不是充分的。ChIP-seq、电泳迁移率变动分析和双荧光素酶报告基因分析表明,LsKN1▽蛋白与 ()的启动子结合并下调其表达,从而改变叶片的腹背轴。本研究为植物叶片发育提供了新的见解,对其他蔬菜作物的结球研究具有重要意义。

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