Primate Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup 56216, Republic of Korea.
National Primate Research Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju 28116, Republic of Korea.
Aging (Albany NY). 2020 Dec 3;13(1):846-864. doi: 10.18632/aging.202190.
African green monkeys (AGMs, ) are Old World monkeys which are used as experimental models in biomedical research. Recent technological advances in next generation sequencing are useful for unraveling the genetic mechanisms underlying senescence, aging, and age-related disease. To elucidate the normal aging mechanisms in older age, the blood transcriptomes of nine healthy, aged AGMs (15‒23 years old), were analyzed over two years. We identified 910‒1399 accumulated differentially expressed genes (DEGs) in each individual, which increased with age. Aging-related DEGs were sorted across the three time points. A major proportion of the aging-related DEGs belonged to gene ontology (GO) categories involved in translation and rRNA metabolic processes. Next, we sorted common aging-related DEGs across three time points over two years. Common aging-related DEGs belonged to GO categories involved in translation, cellular component biogenesis, rRNA metabolic processes, cellular component organization, biogenesis, and RNA metabolic processes. Furthermore, we identified 29 candidate aging genes that were upregulated across the time series analysis. These candidate aging genes were linked to protein synthesis. This study describes a changing gene expression pattern in AGMs during aging using longitudinal transcriptome sequencing. The candidate aging genes identified here may be potential targets for the treatment of aging.
非洲绿猴(AGMs)是旧世界猴,被广泛用于生物医学研究的实验模型。新一代测序技术的最新进展有助于揭示衰老、老化和与年龄相关疾病的遗传机制。为了阐明老年时的正常衰老机制,我们在两年内分析了 9 只健康老年 AGMs(15-23 岁)的血液转录组。我们在每个个体中鉴定出了 910-1399 个随年龄增长而积累的差异表达基因(DEGs)。对三个时间点的衰老相关 DEGs 进行了排序。很大一部分衰老相关 DEGs 属于参与翻译和 rRNA 代谢过程的基因本体(GO)类别。接下来,我们对两年内三个时间点的常见衰老相关 DEGs 进行了排序。常见的衰老相关 DEGs 属于涉及翻译、细胞成分生物发生、rRNA 代谢过程、细胞成分组织、生物发生和 RNA 代谢过程的 GO 类别。此外,我们鉴定了 29 个候选衰老基因,这些基因在整个时间序列分析中上调。这些候选衰老基因与蛋白质合成有关。本研究通过纵向转录组测序描述了 AGMs 在衰老过程中的基因表达模式变化。这里鉴定的候选衰老基因可能是治疗衰老的潜在靶点。