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关于人类组蛋白相互作用网络的数据集。

Data sets on human histone interaction networks.

作者信息

Peng Yunhui, Markov Yaroslav, Goncearenco Alexander, Landsman David, Panchenko Anna R

机构信息

National Center for Biotechnology Information, National Institutes of Health, Bethesda, MD, United States.

Computational Biology and Bioinformatics, Combined Program in the Biological and Biomedical Sciences, Yale University, New Haven, CT, United States.

出版信息

Data Brief. 2020 Nov 21;33:106555. doi: 10.1016/j.dib.2020.106555. eCollection 2020 Dec.

Abstract

Here, we present the data of human histone interactomes generated and analysed in the research article by Peng et al., 2020 [1]. The histone interactome data provide a comprehensive mapping of human histone/nucleosome interaction networks by using different data sources from the structural, chemical cross-linking, and high-throughput studies. The histone interactions are presented at different levels of granularity in networks, including protein, domain, and residue-levels. All human histone interactome Cytoscape session files are available at https://github.com/Panchenko-Lab/Human-histone-interactome.

摘要

在此,我们展示了彭等人在2020年的研究文章[1]中生成并分析的人类组蛋白相互作用组的数据。组蛋白相互作用组数据通过使用来自结构、化学交联和高通量研究的不同数据源,提供了人类组蛋白/核小体相互作用网络的全面图谱。组蛋白相互作用在网络中以不同的粒度级别呈现,包括蛋白质、结构域和残基级别。所有人类组蛋白相互作用组Cytoscape会话文件可在https://github.com/Panchenko-Lab/Human-histone-interactome获取。

相似文献

1
Data sets on human histone interaction networks.关于人类组蛋白相互作用网络的数据集。
Data Brief. 2020 Nov 21;33:106555. doi: 10.1016/j.dib.2020.106555. eCollection 2020 Dec.
10
Interaction networks: from protein functions to drug discovery. A review.相互作用网络:从蛋白质功能到药物发现。综述。
Pathol Biol (Paris). 2009 Jun;57(4):324-33. doi: 10.1016/j.patbio.2008.10.004. Epub 2008 Dec 13.

本文引用的文献

8
Cytoscape 2.8: new features for data integration and network visualization.Cytoscape 2.8:新的数据集成和网络可视化功能。
Bioinformatics. 2011 Feb 1;27(3):431-2. doi: 10.1093/bioinformatics/btq675. Epub 2010 Dec 12.
9
The Protein Data Bank.蛋白质数据库。
Nucleic Acids Res. 2000 Jan 1;28(1):235-42. doi: 10.1093/nar/28.1.235.

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