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临床医生的贝叶斯方法。

Bayesian methods for clinicians.

作者信息

Bidhendi Yarandi Razieh, Mohammad Kazem, Zeraati Hojjat, Ramezani Tehrani Fahimeh, Mansournia Mohammad Ali

机构信息

Department of Epidemiology and Biostatistics, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.

Reproductive Endocrinology Research Center, Research Institute for Endocrine Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

出版信息

Med J Islam Repub Iran. 2020 Jul 13;34:78. doi: 10.34171/mjiri.34.78. eCollection 2020.

DOI:10.34171/mjiri.34.78
PMID:33306050
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7711039/
Abstract

The Bayesian methods have received more attention in medical research. It is considered as a natural paradigm for dealing with applied problems in the sciences and also an alternative to the traditional frequentist approach. However, its concept is somewhat difficult to grasp by nonexperts. This study aimed to explain the foundational ideas of the Bayesian methods through an intuitive example in medical science and to illustrate some simple examples of Bayesian data analysis and the interpretation of results delivered by Bayesian analyses. In this study, data sparsity, as a problem which could be solved by this approach, was presented through an applied example. Moreover, a common sense description of Bayesian inference was offered and some illuminating examples were provided for medical investigators and nonexperts. Data augmentation prior, MCMC, and Bayes factor were introduced. Data from the Khuzestan study, a 2-phase cohort study, were applied for illustration. Also, the effect of vitamin D intervention on pregnancy outcomes was studied. Unbiased estimate was obtained by the introduced methods. Bayesian and data augmentation as the advanced methods provide sufficient results and deal with most data problems such as sparsity.

摘要

贝叶斯方法在医学研究中受到了更多关注。它被视为处理科学应用问题的自然范式,也是传统频率主义方法的一种替代方法。然而,非专业人士 somewhat difficult to grasp 其概念。本研究旨在通过医学领域的一个直观示例来解释贝叶斯方法的基本思想,并举例说明贝叶斯数据分析的一些简单示例以及对贝叶斯分析得出的结果的解释。在本研究中,通过一个应用示例展示了数据稀疏性这一可以用该方法解决的问题。此外,还对贝叶斯推断进行了常识性描述,并为医学研究人员和非专业人士提供了一些有启发性的示例。介绍了数据增强先验、马尔可夫链蒙特卡罗方法(MCMC)和贝叶斯因子。来自胡齐斯坦研究(一项两阶段队列研究)的数据被用于说明。同时,研究了维生素D干预对妊娠结局的影响。通过所介绍的方法获得了无偏估计。贝叶斯方法和数据增强作为先进方法提供了充分的结果,并能处理诸如稀疏性等大多数数据问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a15/7711039/405367c3a069/mjiri-34-78-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a15/7711039/405367c3a069/mjiri-34-78-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a15/7711039/405367c3a069/mjiri-34-78-g001.jpg

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本文引用的文献

1
A brief guide to propensity score analysis.倾向得分分析简要指南。
Med J Islam Repub Iran. 2018 Dec 7;32:122. doi: 10.14196/mjiri.32.122. eCollection 2018.
2
A default prior for regression coefficients.回归系数的默认先验。
Stat Methods Med Res. 2019 Dec;28(12):3799-3807. doi: 10.1177/0962280218817792. Epub 2018 Dec 13.
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Bayesian Zero- Inflated Poisson model for prognosis of demographic factors associated with using crystal meth in Tehran population.用于预测德黑兰人群中与使用冰毒相关的人口统计学因素预后的贝叶斯零膨胀泊松模型。
Med J Islam Repub Iran. 2018 Mar 19;32:24. doi: 10.14196/mjiri.32.24. eCollection 2018.
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Vitamin D Status and Associated Factors in Neonates in a Resource Constrained Setting.资源受限环境下新生儿的维生素D状况及相关因素
Int J Pediatr. 2018 Jul 5;2018:9614975. doi: 10.1155/2018/9614975. eCollection 2018.
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Effectiveness of Prenatal Vitamin D Deficiency Screening and Treatment Program: A Stratified Randomized Field Trial.产前维生素 D 缺乏筛查和治疗方案的效果:分层随机现场试验。
J Clin Endocrinol Metab. 2018 Aug 1;103(8):2936-2948. doi: 10.1210/jc.2018-00109.
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Separation in Logistic Regression: Causes, Consequences, and Control.逻辑回归中的分离:原因、后果与控制。
Am J Epidemiol. 2018 Apr 1;187(4):864-870. doi: 10.1093/aje/kwx299.
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A two-component Bayesian mixture model to identify implausible gestational age.一种用于识别不合理孕周的双组分贝叶斯混合模型。
Med J Islam Repub Iran. 2016 Nov 7;30:440. eCollection 2016.
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Maternal vitamin D levels and the risk of perinatal death.孕妇维生素D水平与围产期死亡风险
J Matern Fetal Neonatal Med. 2017 Jul;30(13):1544-1548. doi: 10.1080/14767058.2016.1202233. Epub 2017 Feb 9.
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BMJ. 2016 Apr 27;352:i1981. doi: 10.1136/bmj.i1981.
10
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