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人类RECQ5与单链DNA重组中间体相互作用的单分子可视化

Single-molecule visualization of human RECQ5 interactions with single-stranded DNA recombination intermediates.

作者信息

Xue Chaoyou, Molnarova Lucia, Steinfeld Justin B, Zhao Weixing, Ma Chujian, Spirek Mario, Kaniecki Kyle, Kwon Youngho, Beláň Ondrej, Krejci Katerina, Boulton Simon J, Sung Patrick, Greene Eric C, Krejci Lumir

机构信息

Department of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032, USA.

Department of Biology, Masaryk University, Brno 62500, Czech Republic.

出版信息

Nucleic Acids Res. 2021 Jan 11;49(1):285-305. doi: 10.1093/nar/gkaa1184.

Abstract

RECQ5 is one of five RecQ helicases found in humans and is thought to participate in homologous DNA recombination by acting as a negative regulator of the recombinase protein RAD51. Here, we use kinetic and single molecule imaging methods to monitor RECQ5 behavior on various nucleoprotein complexes. Our data demonstrate that RECQ5 can act as an ATP-dependent single-stranded DNA (ssDNA) motor protein and can translocate on ssDNA that is bound by replication protein A (RPA). RECQ5 can also translocate on RAD51-coated ssDNA and readily dismantles RAD51-ssDNA filaments. RECQ5 interacts with RAD51 through protein-protein contacts, and disruption of this interface through a RECQ5-F666A mutation reduces translocation velocity by ∼50%. However, RECQ5 readily removes the ATP hydrolysis-deficient mutant RAD51-K133R from ssDNA, suggesting that filament disruption is not coupled to the RAD51 ATP hydrolysis cycle. RECQ5 also readily removes RAD51-I287T, a RAD51 mutant with enhanced ssDNA-binding activity, from ssDNA. Surprisingly, RECQ5 can bind to double-stranded DNA (dsDNA), but it is unable to translocate. Similarly, RECQ5 cannot dismantle RAD51-bound heteroduplex joint molecules. Our results suggest that the roles of RECQ5 in genome maintenance may be regulated in part at the level of substrate specificity.

摘要

RECQ5是人类发现的五种RecQ解旋酶之一,被认为通过作为重组酶蛋白RAD51的负调节因子参与同源DNA重组。在这里,我们使用动力学和单分子成像方法来监测RECQ5在各种核蛋白复合物上的行为。我们的数据表明,RECQ5可以作为一种依赖ATP的单链DNA(ssDNA)运动蛋白,并可以在被复制蛋白A(RPA)结合的ssDNA上移位。RECQ5也可以在RAD51包被的ssDNA上移位,并容易地拆解RAD51-ssDNA细丝。RECQ5通过蛋白质-蛋白质相互作用与RAD51相互作用,通过RECQ5-F666A突变破坏这个界面会使移位速度降低约50%。然而,RECQ5很容易从ssDNA上去除ATP水解缺陷型突变体RAD51-K133R,这表明细丝的破坏与RAD51 ATP水解循环无关。RECQ5也很容易从ssDNA上去除RAD51-I287T,这是一种具有增强的ssDNA结合活性的RAD51突变体。令人惊讶的是,RECQ5可以结合双链DNA(dsDNA),但它无法移位。同样,RECQ5不能拆解RAD51结合的异源双链连接分子。我们的结果表明,RECQ5在基因组维持中的作用可能部分在底物特异性水平上受到调节。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdcb/7797033/9ef89cd3c006/gkaa1184fig1.jpg

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