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系统构建和验证上皮-间充质转化风险模型预测肺腺癌预后。

Systematic construction and validation of an epithelial-mesenchymal transition risk model to predict prognosis of lung adenocarcinoma.

机构信息

Department of Critical Care Medicine, First Affiliated Hospital of Nanchang University, Nanchang 330006, Jiangxi, China.

Department of Rehabilitation Medicine, First Affiliated Hospital of Nanchang University, Nanchang 330006, Jiangxi, China.

出版信息

Aging (Albany NY). 2020 Dec 3;13(1):794-812. doi: 10.18632/aging.202186.

Abstract

Epithelial-mesenchymal transition (EMT) has been shown to be linked to a poor prognosis, particularly in patients with non-small-cell lung cancer. Nevertheless, little is known regarding the existence of EMT-related gene signatures and their prognostic values in lung adenocarcinoma (LUAD). In the current study, we systematically profiled the mRNA expression data of patients with LUAD in The Cancer Genome Atlas and Gene Expression Omnibus databases using a total of 1,184 EMT-related genes. The prognostic values of the EMT-related genes used to develop risk score models for overall survival were determined using LASSO and Cox regression analyses. A prognostic signature that consisted of nine unique EMT-related genes was generated using a training set. A nomogram, incorporating this EMT-related gene signature and clinical features of patients with LUAD, was constructed for potential clinical use. Calibration plots, decision-making curves, and receiver operating characteristic curve analysis showed that this model had a good ability to predict the survival of patients with LUAD. The EMT-associated gene signature and prognostic nomogram established in this study were reliable in predicting the survival of patients with LUAD. Thus, we first identified a novel EMT-related gene signature and developed a nomogram for predicting the prognosis of patients with LUAD.

摘要

上皮-间充质转化(EMT)已被证明与预后不良有关,特别是在非小细胞肺癌患者中。然而,关于 EMT 相关基因特征的存在及其在肺腺癌(LUAD)中的预后价值知之甚少。在本研究中,我们使用总共 1184 个 EMT 相关基因,系统地分析了癌症基因组图谱和基因表达综合数据库中 LUAD 患者的 mRNA 表达数据。使用 LASSO 和 Cox 回归分析确定了用于开发总生存期风险评分模型的 EMT 相关基因的预后价值。使用训练集生成了由九个独特的 EMT 相关基因组成的预后签名。为 LUAD 患者的临床特征构建了包含该 EMT 相关基因特征的列线图,用于潜在的临床应用。校准图、决策曲线和接收者操作特征曲线分析表明,该模型具有良好的预测 LUAD 患者生存能力的能力。本研究中建立的 EMT 相关基因特征和预后列线图可可靠地预测 LUAD 患者的生存情况。因此,我们首次确定了一个新的 EMT 相关基因特征,并为预测 LUAD 患者的预后开发了一个列线图。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fe55/7835007/ce0da18073ec/aging-13-202186-g001.jpg

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