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高效液相色谱筛选法提高了从环境样品中分离植酸酶产生菌的灵敏度、准确性和预测性。

Improved sensitivity, accuracy and prediction provided by a high-performance liquid chromatography screen for the isolation of phytase-harbouring organisms from environmental samples.

机构信息

School of Biological Sciences, University of East Anglia, Norwich Research Park, Norfolk, NR4 7TJ, UK.

Department of Sustainable Agriculture Science, Rothamsted Research, Devon, EX20 2SB, UK.

出版信息

Microb Biotechnol. 2021 Jul;14(4):1409-1421. doi: 10.1111/1751-7915.13733. Epub 2020 Dec 21.

DOI:10.1111/1751-7915.13733
PMID:33347708
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8313252/
Abstract

HPLC methods are shown to be of predictive value for classification of phytase activity of aggregate microbial communities and pure cultures. Applied in initial screens, they obviate the problems of 'false-positive' detection arising from impurity of substrate and imprecision of methodologies that rely on phytate-specific media. In doing so, they simplify selection of candidates for biotechnological applications. Combined with 16S sequencing and simple bioinformatics, they reveal diversity of the histidine phosphatase class of phytases most commonly exploited for biotechnological use. They reveal contribution of multiple inositol-polyphosphate phosphatase (MINPP) activity to aggregate soil phytase activity, and they identity Acinetobacter spp. as harbouring this prevalent soil phytase activity. Previously, among bacteria MINPP was described exclusively as an activity of gut commensals. HPLC methods have also identified, in a facile manner, a known commercially successful histidine (acid) phosphatase enzyme. The methods described afford opportunity for isolation of phytases for biotechnological use from other environments. They reveal the position of attack on phytate by diverse histidine phosphatases, something that other methods lack.

摘要

高效液相色谱法被证明对聚合微生物群落和纯培养物植酸酶活性的分类具有预测价值。在初始筛选中应用时,它们避免了由于基质杂质和依赖植酸盐特定培养基的方法不精确而导致的“假阳性”检测问题。这样做简化了生物技术应用候选物的选择。与 16S 测序和简单的生物信息学相结合,它们揭示了最常用于生物技术应用的组氨酸磷酸酶类植酸酶的多样性。它们揭示了多种肌醇多磷酸盐磷酸酶 (MINPP) 活性对聚合土壤植酸酶活性的贡献,并确定不动杆菌属作为这种普遍存在的土壤植酸酶活性的宿主。以前,MINPP 在细菌中仅被描述为肠道共生菌的一种活性。高效液相色谱法还以简单的方式鉴定了一种已知的商业上成功的组氨酸(酸)磷酸酶。所描述的方法为从其他环境中分离用于生物技术应用的植酸酶提供了机会。它们揭示了不同组氨酸磷酸酶对植酸盐的攻击位置,这是其他方法所缺乏的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/a92877ab5a55/MBT2-14-1409-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/e1834c67ade4/MBT2-14-1409-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/c5f1862b4306/MBT2-14-1409-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/88f75701ee28/MBT2-14-1409-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/021963f86605/MBT2-14-1409-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/a92877ab5a55/MBT2-14-1409-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/e1834c67ade4/MBT2-14-1409-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/c5f1862b4306/MBT2-14-1409-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/88f75701ee28/MBT2-14-1409-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/021963f86605/MBT2-14-1409-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ae/8313252/a92877ab5a55/MBT2-14-1409-g002.jpg

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