School of Biological Sciences, University of East Anglia, Norfolk, Virginia, United States of America.
School of Chemistry, University of East Anglia, Norfolk, Virginia, United States of America.
PLoS One. 2022 Aug 31;17(8):e0272015. doi: 10.1371/journal.pone.0272015. eCollection 2022.
Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass. The enzyme was extraordinarily stable in solution both at room temperature and 4°C, retaining near 100% activity over 755 days. It showed a broad pH activity profile from 2-8.5 with maxima at 3, 4.5-5 and 6. The enzyme showed Michaelis-Menten kinetics and substrate inhibition (Vmax, Km, and Ki, 228 U/mg, 0.65 mM and 2.23 mM, respectively). Homology modelling using the crystal structure of a homologous MINPP from a human gut commensal bacterium indicated the presence of a potentially stabilising polypeptide loop (a U-loop) straddling the active site. By employ of the enantiospecificity of Arabidopsis inositol tris/tetrakisphosphate kinase 1 for inositol pentakisphosphates, we show AC1-2 MINPP to possess D6-phytase activity, which allowed modelling of active site specificity pockets for InsP6 substrate. While phytase gene transcription was unaltered in rich media, it was repressed in minimal media with phytic acid and orthophosphate as phosphate sources. The results of this study reveal AC1-2 MINPP to possess desirable attributes relevant to biotechnological use.
已采用系统发生分析、同源建模和生化方法来对一种来自革兰氏阴性土壤细菌的植酸酶进行了表征。不动杆菌 AC1-2 植酸酶属于组氨酸(酸)植酸酶的 2 类,属于多肌醇多磷酸盐磷酸酶(MINPP)亚类。该酶在室温及 4°C 下于溶液中具有极高的稳定性,在超过 755 天的时间内保留近 100%的活性。它在 pH 值为 2-8.5 的范围内表现出广泛的活性,最大值分别为 3、4.5-5 和 6。该酶表现出米氏动力学和底物抑制(Vmax、Km 和 Ki,分别为 228 U/mg、0.65 mM 和 2.23 mM)。使用来自人类肠道共生菌的同源 MINPP 的晶体结构进行同源建模表明,存在横跨活性位点的潜在稳定多肽环(U 环)。通过利用拟南芥肌醇三/四磷酸激酶 1 对肌醇五磷酸的对映体特异性,我们表明 AC1-2 MINPP 具有 D6-植酸酶活性,这允许对 InsP6 底物的活性位点特异性口袋进行建模。虽然在丰富培养基中植酸酶基因转录没有改变,但在以植酸和正磷酸盐作为磷源的最小培养基中受到抑制。这项研究的结果表明,AC1-2 MINPP 具有与生物技术应用相关的理想属性。