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分析超速离心(AUC):荧光和吸光度 AUC 在生物大分子研究中的应用概述。

Analytical Ultracentrifugation (AUC): An Overview of the Application of Fluorescence and Absorbance AUC to the Study of Biological Macromolecules.

机构信息

Department of Biochemistry, University of Colorado Boulder, Boulder, Colorado.

Howard Hughes Medical Institute, University of Colorado Boulder, Boulder, Colorado.

出版信息

Curr Protoc Mol Biol. 2020 Dec;133(1):e131. doi: 10.1002/cpmb.131.

Abstract

The biochemical and biophysical investigation of proteins, nucleic acids, and the assemblies that they form yields essential information to understand complex systems. Analytical ultracentrifugation (AUC) represents a broadly applicable and information-rich method for investigating macromolecular characteristics such as size, shape, stoichiometry, and binding properties, all in the true solution-state environment that is lacking in most orthogonal methods. Despite this, AUC remains underutilized relative to its capabilities and potential in the fields of biochemistry and molecular biology. Although there has been a rapid development of computing power and AUC analysis tools in this millennium, fewer advancements have occurred in development of new applications of the technique, leaving these powerful instruments underappreciated and underused in many research institutes. With AUC previously limited to absorbance and Rayleigh interference optics, the addition of fluorescence detection systems has greatly enhanced the applicability of AUC to macromolecular systems that are traditionally difficult to characterize. This overview provides a resource for novices, highlighting the potential of AUC and encouraging its use in their research, as well as for current users, who may benefit from our experience. We discuss the strengths of fluorescence-detected AUC and demonstrate the power of even simple AUC experiments to answer practical and fundamental questions about biophysical properties of macromolecular assemblies. We address the development and utility of AUC, explore experimental design considerations, present case studies investigating properties of biological macromolecules that are of common interest to researchers, and review popular analysis approaches. © 2020 The Authors.

摘要

对蛋白质、核酸以及它们所形成的复合物进行生化和生物物理研究,可以提供理解复杂系统所需的重要信息。分析超速离心(AUC)是一种广泛适用且信息量丰富的方法,可用于研究大分子的特性,如大小、形状、化学计量和结合特性,所有这些都在大多数正交方法所缺乏的真正溶液环境中进行。尽管如此,相对于其在生物化学和分子生物学领域的能力和潜力,AUC 的应用仍然不足。尽管在本世纪计算机处理能力和 AUC 分析工具得到了快速发展,但新技术的应用开发进展较少,使得这些强大的仪器在许多研究机构中未得到充分重视和充分利用。由于 AUC 以前仅限于吸光度和瑞利干涉光学,荧光检测系统的加入极大地增强了 AUC 对传统上难以表征的大分子系统的适用性。这篇综述为新手提供了一个资源,强调了 AUC 的潜力,并鼓励他们在研究中使用 AUC,同时也为当前的用户提供了帮助,他们可能会从我们的经验中受益。我们讨论了荧光检测 AUC 的优势,并展示了即使是简单的 AUC 实验也能够回答关于大分子组装体生物物理特性的实际和基本问题的能力。我们讨论了 AUC 的发展和应用,探讨了实验设计的考虑因素,介绍了一些案例研究,这些案例研究涉及到研究人员普遍感兴趣的生物大分子的特性,并回顾了一些流行的分析方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56cc/7816243/7516b7d60276/CPMB-133-e131-g001.jpg

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