Laboratory of Chemical Biology, Department of Cellular and Molecular Medicine, KU Leuven, Herestr. 49, Box 802, 3000 Leuven, Belgium.
AG Chemical Proteomics, Leibniz Institute for Analytical Sciences ISAS, e.V., Otto-Hahn-Str. 6b, 44227 Dortmund, Germany.
Molecules. 2020 Dec 18;25(24):5994. doi: 10.3390/molecules25245994.
Activity-based protein profiling (ABPP) is a powerful technique to label and detect active enzyme species within cell lysates, cells, or whole animals. In the last two decades, a wide variety of applications and experimental read-out techniques have been pursued in order to increase our understanding of physiological and pathological processes, to identify novel drug targets, to evaluate selectivity of drugs, and to image probe targets in cells. Bioorthogonal chemistry has substantially contributed to the field of ABPP, as it allows the introduction of tags, which may be bulky or have unfavorable physicochemical properties, at a late stage in the experiment. In this review, we give an overview of the bioorthogonal reactions that have been implemented in ABPP, provide examples of applications of bioorthogonal chemistry in ABPP, and share some thoughts on future directions.
基于活性的蛋白质谱分析(ABPP)是一种强大的技术,可用于标记和检测细胞裂解物、细胞或整个动物中的活性酶种类。在过去的二十年中,人们追求了各种各样的应用和实验读取技术,以增加我们对生理和病理过程的理解,鉴定新的药物靶点,评估药物的选择性,并在细胞中对探针靶点进行成像。生物正交化学在 ABPP 领域做出了重要贡献,因为它允许在实验的后期阶段引入可能体积庞大或具有不利物理化学性质的标记物。在这篇综述中,我们概述了已在 ABPP 中实施的生物正交反应,提供了生物正交化学在 ABPP 中的应用实例,并分享了对未来方向的一些思考。