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中国特有物种紫堇(罂粟科)的完整叶绿体基因组。

Complete chloroplast genome of a Chinese endemic species Franch. (Papaveraceae).

作者信息

Kanwal Nazish, Zhang Xiao, Afzal Nawal, Yang Jia, Li Zhonghu, Zhao Guifang

机构信息

Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi'an, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2291-2292. doi: 10.1080/23802359.2019.1627930.

DOI:10.1080/23802359.2019.1627930
PMID:33365510
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687375/
Abstract

Franch. is an endemic plant found in China. In this study, we presented the first complete chloroplast genome of which was assembled and characterized based on Illumina pair-end sequencing data. The complete chloroplast genome was 161,410 bp in length, with a GC content of 41.4% in total. Its structure contained a large single copy (LSC) region of 89,127 bp and a small single copy (SSC) region of 16,993 bp, which were separated by a pair of extremely inverted repeats (IRs) of 27,645 bp each, with GC content 39.8, 87.2, and 45.2%, respectively. The phylogenetic analysis indicated that was sister to in Papaveraceae.

摘要

紫堇是中国特有的植物。在本研究中,我们展示了基于Illumina双端测序数据组装和表征的首个完整叶绿体基因组。完整的叶绿体基因组长度为161,410 bp,总GC含量为41.4%。其结构包含一个89,127 bp的大单拷贝(LSC)区域和一个16,993 bp的小单拷贝(SSC)区域,它们被一对各为27,645 bp的极端反向重复序列(IRs)隔开,GC含量分别为39.8%、87.2%和45.2%。系统发育分析表明,紫堇在罂粟科中是与某植物(原文此处未明确)为姐妹关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09a4/7687375/b0fd3750d35b/TMDN_A_1627930_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09a4/7687375/b0fd3750d35b/TMDN_A_1627930_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09a4/7687375/b0fd3750d35b/TMDN_A_1627930_F0001_B.jpg

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