一种新的候选品种——中井大润（木犀科）的完整叶绿体基因组。
The complete chloroplast genome of a new candidate cultivar, Dae Ryun, of Nakai (Oleaceae).
作者信息
Park Jongsun, Min Juhyeon, Kim Yongsung, Xi Hong, Kwon Woochan, Jang Taewon, Kim Gwanho, Park Jae-Ho
机构信息
Infoboss Co., Ltd., Gangnam-gu, Seoul, Republic of Korea.
InfoBoss Research Center, Gangnam-gu, Seoul, Republic of Korea.
出版信息
Mitochondrial DNA B Resour. 2019 Oct 23;4(2):3713-3715. doi: 10.1080/23802359.2019.1679676.
Abstract
To understand genetic features of new candidate cultivar, Dae Ryun of , chloroplast genome was sequenced. Its length is 156,019 bp and has four subregions: 86,783 bp of large single-copy (LSC) and 17,828 bp of small single-copy (SSC) regions are separated by 25,704 bp of inverted repeat (IR) regions including 133 genes (87 protein-coding genes, 8 rRNAs, and 37 tRNAs). Overall GC content is 35.8%. Intraspecies sequence variations among four chloroplast genomes present various numbers. Phylogenetic trees show that is clustered with 12 species.
摘要
为了解新候选品种大润（Dae Ryun）的遗传特征，对其叶绿体基因组进行了测序。其长度为156,019 bp，有四个亚区域：86,783 bp的大单拷贝（LSC）和17,828 bp的小单拷贝（SSC）区域被25,704 bp的反向重复（IR）区域隔开，该区域包含133个基因（87个蛋白质编码基因、8个rRNA和37个tRNA）。总体GC含量为35.8%。四个叶绿体基因组之间的种内序列变异呈现出不同的数量。系统发育树显示，大润与12个品种聚类在一起。
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