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s(螳螂科:缺爪螳亚科)线粒体全基因组序列特征分析及系统发育分析

Characterization of the complete mitochondrial genome sequence of s (Mantidae: Choeradodinae) and phylogenetic analysis.

作者信息

Shi Yan, Liu Qin-Peng, Luo Lan, Yuan Zhong-Lin

机构信息

Key Lab of Integrated Crop Pest Management of Shandong Province, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China.

出版信息

Mitochondrial DNA B Resour. 2019 Sep 2;4(2):2826-2827. doi: 10.1080/23802359.2019.1660250.

DOI:10.1080/23802359.2019.1660250
PMID:33365746
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7706722/
Abstract

The complete mitochondrial genome of the praying mantises was characterized in this study. The circular molecule is 15,416 bp in length (GenBank accession no. MN037794), containing 13 protein-coding genes (PCGs), two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes. The nucleotide composition is asymmetric (39.5% A, 15.1% C, 9.6% G, 35.8% T), with an overall A + T content of 75.3%. The gene arrangement of is identical to that observed in other praying mantises. Seven PCGs are initiated with typical ATN start codons, Four genes (, nad3, nad4L, and ) begin with TTN, nad1 begin with GTT, and use CTT, as initiation codon. Twelve PCGs stop with complete termination codon TAA and TAG, whereas uses incomplete termination codon (T--). Twenty reading frame overlaps and seven intergenic regions are found in the mitogenome of . The phylogenetic relationships based on 13 PCGs show that clusters closest to the species of Mantidae.

摘要

本研究对螳螂的完整线粒体基因组进行了特征分析。该环状分子长度为15416 bp(GenBank登录号:MN037794),包含13个蛋白质编码基因(PCGs)、两个核糖体RNA(rRNA)基因、22个转运RNA(tRNA)基因。核苷酸组成不对称(A占39.5%、C占15.1%、G占9.6%、T占35.8%),A+T总含量为75.3%。其基因排列与其他螳螂中观察到的相同。7个PCGs以典型的ATN起始密码子开始,4个基因(、nad3、nad4L和)以TTN开始,nad1以GTT开始,以CTT作为起始密码子。12个PCGs以完整的终止密码子TAA和TAG结束,而使用不完整的终止密码子(T--)。在的线粒体基因组中发现了20个阅读框重叠和7个基因间隔区。基于13个PCGs的系统发育关系表明,与螳螂科的物种聚类最接近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/957a/7706722/b55f0b4235c7/TMDN_A_1660250_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/957a/7706722/b55f0b4235c7/TMDN_A_1660250_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/957a/7706722/b55f0b4235c7/TMDN_A_1660250_F0001_C.jpg

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本文引用的文献

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Higher tRNA gene duplication in mitogenomes of praying mantises (Dictyoptera, Mantodea) and the phylogeny within Mantodea.线粒体基因组中螳螂(直翅目,螳螂目)的 tRNA 基因重复率较高,以及螳螂目内的系统发育。
Int J Biol Macromol. 2018 May;111:787-795. doi: 10.1016/j.ijbiomac.2018.01.016. Epub 2018 Jan 5.
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Sci Rep. 2016 May 9;6:25634. doi: 10.1038/srep25634.
Complete mitochondrial genomes of four species of praying mantises (Dictyoptera, Mantidae) with ribosomal second structure, evolutionary and phylogenetic analyses.
四种螳螂(直翅目,螳螂科)的完整线粒体基因组及其核糖体二级结构、进化和系统发育分析。
PLoS One. 2021 Nov 4;16(11):e0254914. doi: 10.1371/journal.pone.0254914. eCollection 2021.