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月季(蔷薇科:蔷薇属)叶绿体全基因组的特征分析

Characterization of the complete chloroplast genome of Chinese rose, (Rosaceae: Rosa).

作者信息

Lin Wang, Huang Jing, Xue Meixiang, Wang Xiumei, Wang Chunhua

机构信息

Fujian Provincial Key Laboratory of Ecology-Toxicological Effects & Control for Emerging Contaminants, Key Laboratory of Ecological Environment and Information Atlas (Putian University) Fujian Provincial University, Key laboratory of Loquat Germplasm Innovation and Utilization (Putian University), Fujian Province University, College of Environmental and Biological Engineering, Putian University, Putian, China.

出版信息

Mitochondrial DNA B Resour. 2019 Sep 12;4(2):2984-2985. doi: 10.1080/23802359.2019.1664350.

Abstract

known commonly as the Chinese rose, is a member of the genus Rosa native to Southwest China. In this study, the complete chloroplast genome of was sequenced and analyzed. Structural analysis of the complete chloroplast (cp) genome of that exhibits a typical quadripartite circular structure with 155,097 bp in size, which contains a large single-copy region (LSC) of 85,911 bp, a small single-copy region (SSC) of 17,270 bp and a pair of inverted repeat (IR) regions of 25,958 bp in each one. The cp genome of contains 130 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The phylogenetic Maximum-Likelihood (ML) analysis result shown that and formed an independent clade with a 100% bootstrap support in phylogenetic relationship.

摘要

通常被称为月季,是蔷薇属的成员,原产于中国西南部。在本研究中,对[月季名称]的完整叶绿体基因组进行了测序和分析。[月季名称]完整叶绿体(cp)基因组的结构分析显示,其具有典型的四分体环状结构,大小为155,097bp,其中包含一个85,911bp的大单拷贝区域(LSC)、一个17,270bp的小单拷贝区域(SSC)和一对各为25,958bp的反向重复(IR)区域。[月季名称]的cp基因组包含130个基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育最大似然(ML)分析结果表明,[月季名称]和[另一相关物种名称]在系统发育关系中形成了一个具有100%自展支持的独立分支。

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