……的叶绿体基因组序列及系统发育分析
Sequence and phylogenetic analysis of the chloroplast genome for .
作者信息
Gao Chengwen, Wu Chuanhong, Zhang Qian, Wu Mingxuan, Chen Ruirui, Zhao Yalin, Guo Aiguo, Li Zhiqiang
机构信息
The Affiliated Hospital of Qingdao University & The Biomedical Sciences Institute of Qingdao University (Qingdao Branch of SJTU Bio-X Institutes), Qingdao University, Qingdao, China.
出版信息
Mitochondrial DNA B Resour. 2020 Jul 20;5(3):2922-2923. doi: 10.1080/23802359.2020.1792369.
is a wild shrub rose that is native to open slopes and scrubby areas in central China. In this study, the chloroplast genome sequence of been assembled and characterized by Illumina sequencing. The complete chloroplast genome was 157,214 bp in length, containing a large single-copy region (LSC) of 86,302 bp and a small single-copy region (SSC) of 18,770 bp, which were separated by a pair of 26,071 bp inverted repeat regions (IRs), each. A total contained 137 genes, including 90 protein-coding, 8 rRNA, and 39 tRNA genes. Maximum-likelihood phylogenetic analysis of 15 representative plastomes within the order suggests that closely related to the .
是一种野生灌木玫瑰，原产于中国中部的开阔山坡和灌丛地区。在本研究中，通过Illumina测序组装并表征了其叶绿体基因组序列。完整的叶绿体基因组长度为157,214 bp，包含一个86,302 bp的大单拷贝区域（LSC）和一个18,770 bp的小单拷贝区域（SSC），它们被一对各为26,071 bp的反向重复区域（IR）隔开。总共包含137个基因，包括90个蛋白质编码基因、8个rRNA基因和39个tRNA基因。对该目内15个代表性质体基因组进行的最大似然系统发育分析表明，与密切相关。
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