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药用植物紫苏变种(唇形科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of the medicinal plant var. (Lamiaceae).

作者信息

Chen Qi, Zhang Dequan

机构信息

College of Pharmacy and Chemistry, Dali University, Dali, China.

Institute of Materia Medica, Dali University, Dali, China.

出版信息

Mitochondrial DNA B Resour. 2019 Sep 18;4(2):3055-3056. doi: 10.1080/23802359.2019.1666675.

Abstract

var. is a medicinal plant commonly used in Dali area of southwest China. In this study, we sequenced the complete chloroplast (cp) genome sequence of var. to investigate its phylogenetic relationship in the family Lamiaceae. The total length of the chloroplast genome was 151,965 bp, with 38.4% overall GC content and exhibited typical quadripartite structure, a pair of IRs (inverted repeats) of 25,651 bp was separated by a small single copy (SSC) region of 17,498 bp and a large single copy (LSC) region of 83,165 bp. The cp genome contained 113 genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated var. was closely related to and .

摘要

变种是中国西南部大理地区常用的一种药用植物。在本研究中,我们对变种的完整叶绿体(cp)基因组序列进行了测序,以研究其在唇形科中的系统发育关系。叶绿体基因组全长151,965 bp,总体GC含量为38.4%,呈现典型的四分体结构,一对25,651 bp的反向重复序列(IRs)被一个17,498 bp的小单拷贝(SSC)区域和一个83,165 bp的大单拷贝(LSC)区域隔开。cp基因组包含113个基因,包括79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。系统发育分析表明变种与和密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a6e/7706551/6ca772348679/TMDN_A_1666675_F0001_C.jpg

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